Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01709 ATGCCTGCAGAGAAGTCGAACAGTTGCGATAACGAAGTGGAAGCGTTCGTGGAGGTTGATCCAACGGGGAGGTTTGGGCGTTACAGCGATCTTCTTGGATGCGGAGCTGTGAAGAAGGTTTACAGAGCGTTTGATCAAGAGGAAGGGATTGAGGTGGCGTGGAATCAGGTTCGGCTCAGGAGCTTCAGCGAAGACCCTGTTCTCATCAATCGCCTTCACTCTGAGGTGGAGTTGCTCAGAACCCTCAGCAACAAGTACATCATCGTCTGTTACAGTGTGTGGAAGGACGAGGAGCGCCACAATATCAATTTCATCACCGAGGTCTGCACCTCCGGGAACCTCAGGGATTACCGGAAGAAGCATCGCCATGTCTCCATTAAGGCCTTCAAGAAGTGGTCCAAACAGGTCCTTGAGGGATTGGAGTATCTTCACACGCATGACCCCTGCATCATTCACAGGGATCTCAATTGCAGCAACATCTTTGTTAACGGCAACATTGGCCAGGTGAAAATTGGTGATCTTGGATTGGCTGCAATAGTGGGACGGAACCATGCAGCACATTCAATTTTAGGGACACCGGAGTACATGGCACCGGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGCTTGCTTGAAATGGTAACAATGGAGATACCCTACAGTGAATGTGACAGTGTGGCCAAGATATACAAAAAGGTCACGATGGGAATCAAGCCTCAGGCCTTGAGCAAAGTCACAGATCCTGAGGTGAAAGAATTCATTGAGAAGTGCATAGCACAGCCAAGGGCAAGACCTTCAGCCACGGATCTCCTTAAGGATCCTTTCTTTTATGAACTCCACAATGATGAAGAATCAACGCCGATCATTTGA 894 0.4843 MPAEKSNSCDNEVEAFVEVDPTGRFGRYSDLLGCGAVKKVYRAFDQEEGIEVAWNQVRLRSFSEDPVLINRLHSEVELLRTLSNKYIIVCYSVWKDEERHNINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRNHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGIKPQALSKVTDPEVKEFIEKCIAQPRARPSATDLLKDPFFYELHNDEESTPII 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01709 297 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
Pumo9g01709 297 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01709 297 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Pumo9g01709 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01709 297 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Pumo9g01709 297 CDD STKc_WNK 24 284 - -
Pumo9g01709 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 287 - -
Pumo9g01709 297 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Pumo9g01709 297 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01709 Pumo-Chr9 46208306 46209714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01709 10 284 MAP Kinase Kinase Kinase AT5G55560 78.182 8.93e-171 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo9g01709 Pkinase 9.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01709 K08867 - gmx:100798280 597.045