Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01691 ATGGAGGATCAGAGCCAGATTAGTGCAGATGAAGAAGCCTTTCTGTTTGGCATGGAACTAGCGGGTGCCTTTGCTGTCCCCATGGTCCTCAAGTCAGCTTTGGAACTTGGCATCTTGGAAACTATAGCCAAAGCTGGTCCTGGAGCATACCTTTCCCCTTCTAACATAGCTGCTGAGATCCCAACAATAAAGAACCCCGACGCACCTGCTATGCTGGACCGCATGTTGCGCTTGTTGGCTAGCTACAATATCCTCACATACTCCCTCCCTCAACTGCCTCAAACTGAAAGACACTATGGTCTTCACCCAAAAGCCAAATACCTTGTCAACAATCAACATGGTGTCTCCCTCGCTCCTTACTTTCTCATGCAACAGGACAAAGTCCTCAAAGACATGTGGTATTGTATTTCACTATTCCTTAACACTTTTTTTTTTTTTGCTCTTTCTTCTGGCGCGCAAAGGAAGGTTAGAGTTAGAGGTACGTACGTTGTTAAAATTCAAAATCAGTTATATGTCACCTATAAAGGAAAGATTGTCAGTAACATGAATCAAATATCCCTTCAACGAGATTTTTTCTATATAATAATTAGTGAATTCTTAGATATAGAGTTTAAAGGAGTGTGTTCCTGCTGTAGGTACCACTTGACAGATTCAGTTCAAGAGGGTGGGTTTCCATTTAGCAATGCTTATGGAATGACTGCCTTTGAATTCCATGACACAAATCCTAGATTCAACAAGCTTTTCAATAAGGGATTGTCTGATTGCTCTAGCATCACAATGAAGAAAATTCTTGAGACCTATAATGGCTTTCAGGGTGTTGGATCTGTGGTTGATGTTGGCGGTGGGACTGGAGCTACTATTAATATGGTTGCCTCTAAGTATCCCACTACAAAGTGTGTGTTAATTTTGACTTACCCCACGTCATCAAAGAAGCTCCAGCTTATACAGATTGGCCAGTTTGGTCCAAAAGCCGAAAAATTGACCAAGCGGCATTGCGGCAAGTCGTTTAACCTAAAAATATCAATGGGAACTGGTGTGGAACATATTGGTGGAGACATGTTTGTGAGTGTTCCAAAAGGTGACGCCATTTTTATGAAGTGGGTATGCCATGACTGGAATGACGAGCAATGCTTGAAATTGTTGAAGAATTGTTATGATTCCCTTCCTGACACTGGAAAGGTGATTTTGGCTGAAGGCATCATTCCAGAAACCCCAGATTCTAACTTAGCTTCAAAGTGTGAGTTTCAAATGTTATCATGCTGCGTCATAGCCCAAGTGGAAAAGAGAGAACAGAAAAAGAGTACAAGGCATTGGCTAAAGGAGCTGGATTCCATGGTTTCCGAATAG 1347 0.4202 MEDQSQISADEEAFLFGMELAGAFAVPMVLKSALELGILETIAKAGPGAYLSPSNIAAEIPTIKNPDAPAMLDRMLRLLASYNILTYSLPQLPQTERHYGLHPKAKYLVNNQHGVSLAPYFLMQQDKVLKDMWYCISLFLNTFFFFALSSGAQRKVRVRGTYVVKIQNQLYVTYKGKIVSNMNQISLQRDFFYIIISEFLDIEFKGVCSCCRYHLTDSVQEGGFPFSNAYGMTAFEFHDTNPRFNKLFNKGLSDCSSITMKKILETYNGFQGVGSVVDVGGGTGATINMVASKYPTTKCVLILTYPTSSKKLQLIQIGQFGPKAEKLTKRHCGKSFNLKISMGTGVEHIGGDMFVSVPKGDAIFMKWVCHDWNDEQCLKLLKNCYDSLPDTGKVILAEGIIPETPDSNLASKCEFQMLSCCVIAQVEKREQKKSTRHWLKELDSMVSE 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01691 448 PANTHER O-METHYLTRANSFERASE 20 431 IPR016461 GO:0008168
Pumo9g01691 448 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 211 410 IPR029063 -
Pumo9g01691 448 Pfam O-methyltransferase domain 213 301 IPR001077 GO:0008171
Pumo9g01691 448 Pfam O-methyltransferase domain 339 431 IPR001077 GO:0008171
Pumo9g01691 448 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 448 IPR016461 GO:0008168
Pumo9g01691 448 Pfam Dimerisation domain 28 80 IPR012967 GO:0046983
Pumo9g01691 448 Gene3D - 228 263 IPR036388 -
Pumo9g01691 448 Gene3D Vaccinia Virus protein VP39 245 301 IPR029063 -
Pumo9g01691 448 Gene3D Vaccinia Virus protein VP39 344 422 IPR029063 -
Pumo9g01691 448 Gene3D - 24 141 IPR036388 -
Pumo9g01691 448 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Pumo9g01691 448 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01691 Pumo-Chr9 46018397 46021233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01691 213 425 Monolignol Biosynthesis Gene Families AT5G54160 53.052 1.43e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01691 K13066 - ming:122073509 252.677