Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01673 ATGGCTGCACAAGCTCTTGTATCATCATCATCTCTTACCTTCTCAGCGGAGGCTGCAAGACAAAGTCTTGGAGCAAGATCACTCCAATCCCCAATTGGGTTCTCCAGAAAAGGCTCCTTCATTGTTAAGGCAGCTTCTACTCCCCCTGTCAAGCAAGGAGCAGACAGACCTTTGTGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGATGGCAGCCTTCCGGGTGACTATGGATTTGACCCTCTGGGACTTTCAGACCCTGAAGGAACAGGAGGGTTCATTGAGCCCAAATGGCTAGCATATGGTGAGGTCATCAATGGTCGTTATGCAATGTTGGGTGCAGTTGGTGCTATAGCACCTGAAATTCTAGGCAAGGCCGGTCTGATCCCTCAGGAGACAGCACTCCCATGGTTCAAAACCGGTGTGTTCCCACCTGCAGGAACATACAACTACTGGGCAGACTCCTACACACTCTTTGTGTTTGAGATGGCACTGATGGGATTTGCAGAGCACAGAAGGTTCCAAGATTGGGCCAAGCCAGGCTCTATGGGTAAACAATACTTCTTAGGACTAGAAAAAGGTCTTGGAGGTTCTGGTGAGCCAGCTTACCCAGGAGGACCTTTCTTCAACCCTCTTGGTTTTGGTAAGGATGAGAAGTCCTTGAAGGATTTGAAGCTCAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCAATCTTGGGTTACTTTGTTCAAGCTCTTGTCACAGGTGTTGGGCCATACCAAAACCTCCTAGATCATCTGGCTGACCCCGTGCACAACAACATCTTGACCAGTCTCAAGTTCCACTAA 831 0.4838 MAAQALVSSSSLTFSAEAARQSLGARSLQSPIGFSRKGSFIVKAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFKTGVFPPAGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNNILTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01673 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 271 IPR001344 GO:0009765|GO:0016020
Pumo9g01673 276 Pfam Chlorophyll A-B binding protein 67 246 IPR022796 -
Pumo9g01673 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
Pumo9g01673 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Pumo9g01673 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01673 Pumo-Chr9 45870766 45872527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01673 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 83.696 1.43e-164 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01673 K08909 - gmx:100808379 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01673 9 45870766 45872527 Pumo9g01673 9 45870766 45872527 ECH