Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01660 ATGGGTTGTTGCCAATCATCGATGTTGCTGAGAGTGCGAGAGAGGGAGACTCACCCGGAAAAGGAGAAGGAAAAAGAAAAAGAGCAAGCGTACGGAAACCACAAGAGGCAGTCAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGCGAGAAAGAGGGGGTGGATTTCTCGTTCTCAGAGTTTTCGCTGGCGGAGCTGAAGGGGGCGACGAACAATTTCAGCTCGGAGTATATCGTGTCAGAGAGTGGGGAGAAGGCGCCGAACCTGGTGTACAAGGGTCGGCTCCAGAACCAGAGCCGTTGGATTGCGGTGAAGAAGTTCAGCAAGGCTGCTTGGCCGGATCCAAAGCAATTCGTGGAAGAGGCTTCGGGCGTCGGCAAGTTGCGCCATCCAAGGCTGGCTAATTTGATCGGTTACTGCTGCGACGGCGATGAGAGGCTCCTCGTTGCCGAGTACATGCCTAATGACACGCTGGCCAAGCATCTATTCCACTGGGAAACTCAGACTATTGAGTGGGCCATGCGCTTGCGAGTGGCTCTTTTTATCGCACAGGCTTTGCATTATTGCAGTTCTGAGGGGCGGCCCTTGTACCATGACTTGAATGCTTACCGTGTTCTCTTCGACCAGGAAGGTGATCCCCGTCTCTCTTGTTTTGGTTTCATGAAGAACAGCAGGGATGGCAAGAGTTATAGCACCAATCTTGCTTACACACCTCCTGAATATTTAAGAAACGGAAGGGTCACGCCTGAAAGTGTCATTTACAGCTTTGGAACCGTTCTTCTAGACCTCCTCAGTGGCAAGCACATCCCTCCCAGTCATGCACTTGATATGATACAGGGGAAAAACAACATGCTCTTAATGGATTCACATTTGGAGGGAAAGTTCTCAATTGAAGAGGCTACAGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCAAGGGAGCGGCCTGATACAAAGGATTTGGTCACAACACTTGCCCCGTTGCATACAAAACCCGATGTTCGTTCTCACATTATGCTTGGAATTCCAAAGCACGAGGAAGCTCCATCAACCCCACAACGTCCTCTTTCGGCAATGGGTGAGGCTTGTTCAAGAATGGACCTAACTGCAATACATCAGATATTGGTTACGACACACTACAAAGACGATGAAGGAACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGAAAAGGACTTCAAGACAGCCATTGATAACTATTCCCAGTTTATTGATGTTGGAACGATGGTCTCCCCAACTGTTTTTGCAAGGCGCAGTCTATGCTATCTGTTATGTGATCAAGCAGATCCTGCGCTACGAGATGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCCACGGCTTTCTACATGCAATCAGTTGCTCTTGCAAAGCTGGACATGCACAAGGATGCGGCTGATATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGGCAAAGAGGAGGGAGAGGATCATAG 1539 0.4925 MGCCQSSMLLRVRERETHPEKEKEKEKEQAYGNHKRQSEGEGEGEGEGEKEGVDFSFSEFSLAELKGATNNFSSEYIVSESGEKAPNLVYKGRLQNQSRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALFIAQALHYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSIEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVRSHIMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVTTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDYAFREKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQADPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGGRGS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01660 512 Gene3D Transferase(Phosphotransferase) domain 1 153 344 - -
Pumo9g01660 512 Gene3D Phosphorylase Kinase; domain 1 47 151 - -
Pumo9g01660 512 SUPERFAMILY Protein kinase-like (PK-like) 56 331 IPR011009 -
Pumo9g01660 512 FunFam probable serine/threonine-protein kinase At4g35230 401 510 - -
Pumo9g01660 512 SUPERFAMILY TPR-like 404 505 IPR011990 GO:0005515
Pumo9g01660 512 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 25 507 IPR045845 GO:0004672|GO:0009742
Pumo9g01660 512 ProSiteProfiles Protein kinase domain profile. 75 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01660 512 Gene3D Tetratricopeptide repeat domain 401 509 IPR011990 GO:0005515
Pumo9g01660 512 FunFam probable serine/threonine-protein kinase At5g41260 153 344 - -
Pumo9g01660 512 MobiDBLite consensus disorder prediction 1 51 - -
Pumo9g01660 512 Pfam Protein kinase domain 88 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01660 512 FunFam probable serine/threonine-protein kinase At4g35230 47 151 - -
Pumo9g01660 512 MobiDBLite consensus disorder prediction 11 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01660 Pumo-Chr9 45734553 45742127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01660 60 351 Glycoside Hydrolase AT3G07070 34.713 3.34e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pumo9g01660 Pkinase 3.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01660 K14500 - gmx:100808907 974.156