Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01645 ATGGGCAACACATGCCGCGGATCTTTGAAAGGGAAATATATTCAGGGCTTCAGCCAGCCCGAAGACCATTCCAAGCGCACCACCCATTCTGATCCCTCCGACTCAACAAAACAAAATCTCAACTCTGCAGAAAACAACAACAACAACAACGGTAACAATCTACCCTTCAGCGCCAAGAAAGAAGCCATCATGCGCCGCGGCCTCGACAACCAAGCATATTATGTCTTGGGCCATAAGACTCCCAACATTCGTGATCTATACACTCTTGGCCGTAAATTGGGACAGGGCCAATTTGGTACAACTTATTTATGCACCGAGAATTCTACCTCCATTGAATATGCCTGCAAATCCATCTCCAAAAGGAAGTTGATTTCCAAGGAGGACGTCGAGGACGTTAGGAGGGAAATTCAGATAATGCATCATTTAGCTGGTCACAAGAACATTGTCACCATCAAGGGTGCTTATGAGGATCCACTCTATGTTCATATTGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAGAGGGGCCACTATACCGAGAGGAAGGCTGCAGAGTTGACCAAAATTATTGTTGGCGTTGTTGAGGCTTGCCATTCCCTCGGGGTTATGCATAGAGATCTCAAGCCTGAAAACTTTTTGTTGGTCAACAAAGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGTCTCTCCGTTTTCTTCAAACCTGGTCAAGTTTTCACTGATGTAGTCGGCAGCCCATACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACAGCAGGTGTCATACTTTACATATTGCTTAGTGGCGTGCCGCCATTTTGGGCAGAGACCCAGCAGGGTATATTTGATGCAGTATTGAAGGGACATATAGATTTTGACTCAGATCCTTGGCCTCTAATATCTGACAGTGCAAAAGATCTTATTAGAAAGATGCTATGTTCTCAGCCTTCAGAACGGTTGACTGCTCATCAAGTGTTATGTCATCCTTGGATATGTGAAAATGGAGTTGCCCCTGACAGGTCACTGGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTCTGCGAGTGATTGCTGAAAGTCTATCCGAAGAGGAGATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGATACTGATAATAGTGGTGCAATCACTTTCGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATACAGAAATACGCGATCTGATGGAAGCGGCTGATGTGGATAAAAGTGGAACCATAGATTATGGGGAGTTTATTGCTGCAACAGTTCACCTCAACAAACTAGAGCGTGAAGAACATCTTATTGCAGCATTCCAATATTTTGACAAGGATGGTAGTGGTTATATTACAGTTGATGAACTTCAACAAGCTTGTGCAGATCATAACATGACTGATGCTTTTCTTGAAGATATTATTAGAGAAGTTGACCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGCTGCCATGATGCAAAAGGGTAACGCTGGAATTGGTAGGAGGACTATGCGCAACAGTCTGAATTTAAGCATGAGAGATGCACCAAGTGCTCAATAG 1653 0.4362 MGNTCRGSLKGKYIQGFSQPEDHSKRTTHSDPSDSTKQNLNSAENNNNNNGNNLPFSAKKEAIMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSQPSERLTAHQVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDKSGTIDYGEFIAATVHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACADHNMTDAFLEDIIREVDQDNDGRIDYGEFAAMMQKGNAGIGRRTMRNSLNLSMRDAPSAQ 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01645 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pumo9g01645 550 SMART serkin_6 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01645 550 ProSiteProfiles Protein kinase domain profile. 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01645 550 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Pumo9g01645 550 ProSitePatterns EF-hand calcium-binding domain. 507 519 IPR018247 -
Pumo9g01645 550 SMART efh_1 428 456 IPR002048 GO:0005509
Pumo9g01645 550 SMART efh_1 464 492 IPR002048 GO:0005509
Pumo9g01645 550 SMART efh_1 392 420 IPR002048 GO:0005509
Pumo9g01645 550 SMART efh_1 498 526 IPR002048 GO:0005509
Pumo9g01645 550 Gene3D Transferase(Phosphotransferase) domain 1 173 354 - -
Pumo9g01645 550 MobiDBLite consensus disorder prediction 33 55 - -
Pumo9g01645 550 ProSitePatterns EF-hand calcium-binding domain. 437 449 IPR018247 -
Pumo9g01645 550 FunFam Calcium-dependent protein kinase 1 353 527 - -
Pumo9g01645 550 FunFam Calcium-dependent protein kinase 1 89 172 - -
Pumo9g01645 550 ProSiteProfiles EF-hand calcium-binding domain profile. 496 529 IPR002048 GO:0005509
Pumo9g01645 550 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Pumo9g01645 550 CDD STKc_CAMK 87 344 - -
Pumo9g01645 550 Gene3D Phosphorylase Kinase; domain 1 89 172 - -
Pumo9g01645 550 SUPERFAMILY Protein kinase-like (PK-like) 71 369 IPR011009 -
Pumo9g01645 550 Pfam Protein kinase domain 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01645 550 SUPERFAMILY EF-hand 369 526 IPR011992 -
Pumo9g01645 550 Pfam EF-hand domain pair 393 453 IPR002048 GO:0005509
Pumo9g01645 550 Pfam EF-hand domain pair 463 524 IPR002048 GO:0005509
Pumo9g01645 550 ProSitePatterns EF-hand calcium-binding domain. 473 485 IPR018247 -
Pumo9g01645 550 FunFam Calcium-dependent protein kinase 5 173 353 - -
Pumo9g01645 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 79 519 - -
Pumo9g01645 550 Gene3D - 355 527 - -
Pumo9g01645 550 ProSiteProfiles EF-hand calcium-binding domain profile. 388 423 IPR002048 GO:0005509
Pumo9g01645 550 MobiDBLite consensus disorder prediction 1 55 - -
Pumo9g01645 550 ProSiteProfiles EF-hand calcium-binding domain profile. 460 495 IPR002048 GO:0005509
Pumo9g01645 550 ProSiteProfiles EF-hand calcium-binding domain profile. 424 459 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01645 Pumo-Chr9 45533132 45539810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01645 1 546 EF-hand Containing Proteins AT2G17290 84.826 0.0 961
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo9g01645 Pkinase 3.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01645 K13412 - gmx:100778173 1059.28