Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01641 ATGATGGATAACGAGGTGCTAGAATTTGATATTGGGCTGGGAGGAGGCGAGGGAGAATATGACGATGATGGAGGGGACATTGAACACCCAATTGATGAGGAGGAATTGGGTGCTGTAGCCACTGGAGGTGGGGAAATATATCTTCCTGATGGGGACCTCTTAGATCTTGAACCTTGCGAGGGCATGGAATTCGAGTCTGAAGAGGCTGCCAAGGCCTTCTACAATTCCTATGCCCGTCGTGTTGGGTTTAGTACTCGTGTCAGCTCATCTCGTCGTTCCAGGCGCGATGGAGCTATTATACAGAGGCAATTTGTTTGCGCAAAGGAGGGTTTCCGCAACTTGAATGAGAAACGCACCAAGGATAGAGAGATCAAGCGCCCACGAACAATTACCAGAGTCGGATGTAAAGCGTCTTTGTCTGTCAAAATGCAAGACTCTGGCAAGTGGATTGTGTCTGGCTTTGTTAGAGAACATAATCACGAACTCGTTCCACCAGACCAGGTGCATTGCCTTCGCTCTCACAGGCAAATATCAGGAGCTGCCAAGACTCTCATCGATACTTTACAGGCTGCTGGGATGGGTCCTCGTAGAATTATGTCAGCACTAATTAAAGAGTATGGTGGGATTAGCAAAGTCGGCTTTACAGAGGTGGACTGTAGGAATTACATGAGGAATAATAGGCAGAGAAGTTTAGAAGGGGACATTCAACTTGTTCTCGATTATTTGAGACAAATGCATGCCGAAAACCCTAATTTCTTCTATGCTGTGCAAGGGGATGAGGATCAGTCCATAAGCAATGTTTTCTGGGCTGATCCCAAGGCAAGGATGAATTATACATTTTTTGGTGATACTGTAACTTTTGACACTACATACCGATCTAATAGGTATCGGTTACCATTTGCTCCCTTTACAGGTGTAAACCATCATGGGCAACCTGTTCTCTTTGGTTGTGCTTTCCTAATTAACGAATCTGAAGCATCATTTGTGTGGCTTTTCAAGACATGGCTTATGGCCATGTCTGGACGTCCGCCAGTGTCAATAACAACTGATCATGATTCTGTAATTCGGTCAGCCATAATACAAGTCTTCCCTGAGACCCGCCACCGTTTCTGCAAGTGGCACATCTTTAAAAAATGCCAGGAGAAGTTATCTCATATTTTCCTCCAATATCCAAATTTTGAAGCTGAATTTCACAAATCTGTTAACTTGACTGAGTCGACTGAGGAATTTGAGTCTTGCTGGTCAACACTTGTAGATAAATATGATCTCAGGGACCATGAATGGCTTCAAGCAATATATTCTGCATGTAGGCAGTGGGTACCTGTATATTTGCGAGACACATTCTTTGCAGAAATGTCCATCACTCAGCGAAGTGATAGCATGAACTCTTACTTTGATGGGTATATAAATGCTTCAACCAATTTAAATCAGTTCTTTAAGCTCTATGAGAAAGCACTTGAAAGTCGCAATGAGAAAGAAGTGAGAGCAGATTATGATACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTTTACACGAGAAAAATTTTCATGAGGTTCCAGGAGGAGTTAGTTGGGACACTTACATTCATGGCATCCAAAGCTGATGATGATGGGGAGGTCATTACATATCATGTAGCTAAATTTGGAGAGGACCATAAAGGGTATTGTGTTAAATTCAATGTTTTGGAGATGAAAGCGACTTGCAGTTGCCAAATGTTTGAGTTTTCAGGCCTTCTTTGTAGGCATGTTTTGGCAGTCTTTAGAGTTACCAATGTGCTTACTCTCCCATCTCATTATATTCTGAAACGTTGGACAAGAAATGCCAAAAGCAATGTAATATTAGAAGAACATTCTTCTGATGTATATACTTACTATTTGGAATCTCATACAGTTAGATATAACACCCTCCGACATGAGGCCTTTAAATTTGTTGATGAAGGCGCACAGTCTGCTGAAACTTATGATGTTGCAATGGATGCTTTACAAGAAGCTGCAAAAAGAGTTTCTCAGGCAATGCAAAATGAGGGAAAAATTCCTATCAGTAATGGAAAGGTAAGGAGCCACGTGCTGAATGATGAAAGTCATGCTAATTACACAAGTGGGTGCCAGGAAGAAAGCTTGAGCCAGCATATGTCTAAGGATGATTTGGATAAGAATATTAGAAAACTTATGAATGAGCTTGAGTGTGCAAATCGGAAGTGTGAAATTTATCGGTCCAACCTGCTTTCAGTTTTGAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCAGTTAAGGTGGAAAACATCAAGATAAGCATGAAAGATGGCATCTAA 2343 0.4191 MMDNEVLEFDIGLGGGEGEYDDDGGDIEHPIDEEELGAVATGGGEIYLPDGDLLDLEPCEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAENPNFFYAVQGDEDQSISNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGRPPVSITTDHDSVIRSAIIQVFPETRHRFCKWHIFKKCQEKLSHIFLQYPNFEAEFHKSVNLTESTEEFESCWSTLVDKYDLRDHEWLQAIYSACRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYINASTNLNQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKADDDGEVITYHVAKFGEDHKGYCVKFNVLEMKATCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILEEHSSDVYTYYLESHTVRYNTLRHEAFKFVDEGAQSAETYDVAMDALQEAAKRVSQAMQNEGKIPISNGKVRSHVLNDESHANYTSGCQEESLSQHMSKDDLDKNIRKLMNELECANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGI 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01641 780 SMART 26again6 576 603 IPR006564 GO:0008270
Pumo9g01641 780 Pfam SWIM zinc finger 553 599 IPR007527 GO:0008270
Pumo9g01641 780 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 680 IPR031052 GO:0006355
Pumo9g01641 780 Pfam FAR1 DNA-binding domain 73 164 IPR004330 -
Pumo9g01641 780 Coils Coil 723 750 - -
Pumo9g01641 780 ProSiteProfiles Zinc finger SWIM-type profile. 565 601 IPR007527 GO:0008270
Pumo9g01641 780 Pfam MULE transposase domain 285 378 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01641 Pumo-Chr9 45482875 45490580 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo9g01641 MULE 2.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01641 - - gmx:100793442 1484.54