Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01627 ATGACGCGTTTTCCCATCAAAATCACTAGATGGCTGACACAGGTAGCGGTATGGAGATTTGTTGGTTTTGTTTCAACTATTGTTGGACTTCTTTGTTATGCTCTCAGCTCCTCCTTCAACTATCTATTCGGAGAGTGGAGCTTGTTGAAGATCTTTCTCTATGGTGGTTTTAGTGTCTTCATCTGCCTTGGGAATCTGTTTGCAAAGGTATGTCGACCCTCGAATAGTCTCTGGCTCAAAGCTCATTCATCATTCTTGCTTTTGACCATCACATCTGTGTATTCCTATTTTGCTGACAAAGCTGTGAATGGAAAACCGGATGTATATAGCTTGATTTCGTGTGTTGCCTTTGTTATCATGTCGTTTAGCCTGTCAAGGCAAACTCAGTGCGGATTTGAAGTGGATCTTTTTTATTTTTTCATGGGATGTCTAATAGTACTACTCTTGAAGATTAAACTGGTATTAGGTGTTGCTGGAGTAGTTTTCAGCTACACCCTTATTATTCTTCGTTCCTCTTTAGACACCACAACATACCATAATCTTGTGGTCCAAGATGATCAACTGGCTAGTACTACTGATTCTTCTGCAGTAGTGCTTTTCGTTGATCAACTGGGACGTACTGATATTGATGTAACAGCGGTGCAAGATATCCTCGTGGAAGCGCAACAAGATAATGCTAGTATGATGCAACAACTCATGGCTTGTATCGAAGTGCTTAGGCAGGGCAATTCGAATCTCACCAACATGCTTTTGGAGCATATGAAGGAATACTTTGAAGATAAATCTGAACTAGCTGGTATGGACCATAACTTTGTGATCGACGCGCTACCATCGGGAAAAATCAACGACCTTGAGGAAACTATAAAGCTGATGGTGGGCGATATTGGGCTTGAGAAAGAGTGCTGCGACGTGTACTGGGAAGCCACGGTTCAATTGCTGAATTTTGCTGAAGCTGTTGCGAGTGGGAGCCATTCGGAGTGGCGTTTGTCAAAAATCCTTGACATGTTTGAGACATTGCGTGACCTAATTCCTGAGTTTCAATCATTGTTTCCGGAGTCACTGGTAAAGGAAGTAATGACAGTCCATGACAAATTAGGAGAGACAAGCAGGGACATTTTCATGAACATGAAAAATGTGATTTTCGATATCCCAGAGACCAAGATAATTGCCCCCGCAGATGGCAGGGTTCATCTAATGACCAAATATGTCATTCGCTACCTTGTTTTCGCGAGTCGGGCACAAAAGATCTTGGAGCAAATTTTAGAACAATACCCTAAGTTTGCCAATGAAGCAGGAAAATCTTCTTCGGTTTCTCATCAGATTGATCAAATAATGAAGCGATTGGAGACAGAACTTGTGGCAATGTCCAAAAACTACGAGAACCCTGCTTTACGTTACTTTTTCATGATGAATAATTGGAGGTACGTAGAGCTAGAGGCAAATAAGTTGGGATTAGACCTTGATTGTTTCCAAAAAGACACAACAAAAGTTCAACAAAACCTCGAACTTTATCAAAGTAGCTCTTGGAATTTGGTGCTAGACTTGTTGAAGCTAGAGAACAGTGAGTTAGTTGAGCCTAATGCCAACGCAGAGTCACTGAAAGGCAACCTCAATTTGTTCAACATGCACTTTAAGGATATATGTATGCACTCAATCTAG 1659 0.4135 MTRFPIKITRWLTQVAVWRFVGFVSTIVGLLCYALSSSFNYLFGEWSLLKIFLYGGFSVFICLGNLFAKVCRPSNSLWLKAHSSFLLLTITSVYSYFADKAVNGKPDVYSLISCVAFVIMSFSLSRQTQCGFEVDLFYFFMGCLIVLLLKIKLVLGVAGVVFSYTLIILRSSLDTTTYHNLVVQDDQLASTTDSSAVVLFVDQLGRTDIDVTAVQDILVEAQQDNASMMQQLMACIEVLRQGNSNLTNMLLEHMKEYFEDKSELAGMDHNFVIDALPSGKINDLEETIKLMVGDIGLEKECCDVYWEATVQLLNFAEAVASGSHSEWRLSKILDMFETLRDLIPEFQSLFPESLVKEVMTVHDKLGETSRDIFMNMKNVIFDIPETKIIAPADGRVHLMTKYVIRYLVFASRAQKILEQILEQYPKFANEAGKSSSVSHQIDQIMKRLETELVAMSKNYENPALRYFFMMNNWRYVELEANKLGLDLDCFQKDTTKVQQNLELYQSSSWNLVLDLLKLENSELVEPNANAESLKGNLNLFNMHFKDICMHSI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01627 552 SUPERFAMILY Cullin repeat-like 232 549 IPR016159 -
Pumo9g01627 552 PANTHER EXOCYST COMPLEX PROTEIN EXO70 308 548 IPR004140 GO:0000145|GO:0006887
Pumo9g01627 552 Pfam Exo70 exocyst complex subunit 304 549 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo9g01627 552 Gene3D Exocyst complex component Exo70 306 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01627 Pumo-Chr9 44659048 44660939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01627 308 551 EXO70 exocyst subunit family AT5G58430 41.502 1.14e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01627 - - gmx:100788866 507.294