Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01625 ATGCCTTTCCGAAATTCCAATAGGCTAGTACAGAAAAAGCTATGGAGAATTGTGGGATTTTTGTCAAGTGTGGCTGGACTAATCTGTTACTCGTTGAGTTCCTCTTTCAACCATCTATTTGGAGAGTGGAACTTCTTGAAGATCATCCTTTACACCGTGGTAAGTTTCTCTATCAGCAGCATCATGTTATTTTTGAAGAAATGGAAACGTTCCAACAGTTTCTCGCTGAAAGCTCACATGGGTGTTCTGGTTTTGTTGCTCACTTCTTTGTACTCTTTTGTATCTGACAAAGCTGTGAATGGAAAACCAGATCTATTAAGTTTGATTTCATGTGTAGCCTTTGCTTTAATGTCTCTGTGCCTTTCAAGGCAGATTGACATTGGGTTTGAAGCAGATCTCCTCAATTTCTTCCTTGGATGTCTAACTGTTCAACTAGTAGAGATCAATTTGATGCTCTCTATTGTTGCAGCCATCTTCTGCTACTGTTTCATAGTTCTTCGTTCCAAATTGGATTCTCAGTCACAAGTTGGAACTGTAGAGGCGAAAGACCATGTAAACATAGAAATTGATGCTGAAAAAGGAGGAGAAAGAGGATTTGATGACAACTTAAGTGAGTCAAGTGACTTCCAATCTAATCATAGCAATATTGACCACCAACAAATTCCGTTGTTAAGAATGGTGGGTGATGGGTACAATTGGAAAAAATATGAAGACAAAGTAGTGAAAGGAAGTGACAATCAGATAAGTTACTACAAATGCACACAACCCAATTGCTATGTGAAGAAAAAAGTTGAGAGAACTATAGAGGGGGAAATTATTGAGATACACTACCAGGGTACCCATCCACATTACAAGCGAATGCATAATATGAAGAGGAACTCTTCATCTGAATATTTATATTCAGTGTTACCTTCAGAGCCTGTTACCACTTACTTGCCAAATCAATCATTTGCCTCCCAGGGCAATGGAAAATTGGATTATGATCCGCAGCACCGAAGAACTCCTCAATATCCACATGAAGTATGA 1026 0.3879 MPFRNSNRLVQKKLWRIVGFLSSVAGLICYSLSSSFNHLFGEWNFLKIILYTVVSFSISSIMLFLKKWKRSNSFSLKAHMGVLVLLLTSLYSFVSDKAVNGKPDLLSLISCVAFALMSLCLSRQIDIGFEADLLNFFLGCLTVQLVEINLMLSIVAAIFCYCFIVLRSKLDSQSQVGTVEAKDHVNIEIDAEKGGERGFDDNLSESSDFQSNHSNIDHQQIPLLRMVGDGYNWKKYEDKVVKGSDNQISYYKCTQPNCYVKKKVERTIEGEIIEIHYQGTHPHYKRMHNMKRNSSSEYLYSVLPSEPVTTYLPNQSFASQGNGKLDYDPQHRRTPQYPHEV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01625 341 ProSiteProfiles WRKY domain profile. 222 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01625 341 SMART WRKY_cls 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01625 341 Gene3D WRKY domain 216 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01625 341 Pfam WRKY DNA -binding domain 229 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01625 341 SUPERFAMILY WRKY DNA-binding domain 225 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01625 341 MobiDBLite consensus disorder prediction 319 341 - -
Pumo9g01625 341 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 208 296 IPR044810 GO:0003700
Pumo9g01625 341 MobiDBLite consensus disorder prediction 326 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01625 Pumo-Chr9 44650976 44652338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01625 225 285 WRKY Transcription Factor Family AT2G38470 63.934 2.01e-19 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo9g01625 WRKY 9.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01625 - - gmx:102667674 563.918