Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01622 ATGAAAATGGAAGAGAAGATTTTTTGTAACCCATTTGTGAATGTAATTGTTCGGCCAGATGCCACGGCTAATCCAATGACCTATTGTGTCATGGACTACTTGGAGCTAATTTTGGAACAATTCCGTAAGTTTGCTGATAGAACAGGTACAAATTCTTCTATTTCTGATCAGATTAATCGAATAATGAAGCGATTGGAGAGAGAACTAGTGGCAATGTCCAAAAACTACAAGTACCCTGCTTTACGCCACCTTTTCATGAAGAATAATTGGAGGCACATAGAGCGAAGGGCAGCAAAGTTGGGATTAGACGACCTTGATTTTTTCCAAAACAGCGCAACAGTAGTTCGACAAAATCTCGAACTTTATCAGAGAAGCTCTTGGAATATGGTGCTAGACTTTTTGAAGCTAGAGGACGATGAGTTAGTGGACGCACAGTCTATCAAAGATGACCTGATCAACAAGCACATTGAGTTTATATGTAGCCATCAGTCTACATGGCTTGCCTCTGAAGATCTGCTAAGTGAACAAAAATTGATAATACCAATTGTTGATGCCAGTGAGATTAGTTTATTTAACAAAAAGCGTCTTGTTAGGCGTTCAATTTTGAAGAAAAACTCGTTCGGATAG 627 0.3892 MKMEEKIFCNPFVNVIVRPDATANPMTYCVMDYLELILEQFRKFADRTGTNSSISDQINRIMKRLERELVAMSKNYKYPALRHLFMKNNWRHIERRAAKLGLDDLDFFQNSATVVRQNLELYQRSSWNMVLDFLKLEDDELVDAQSIKDDLINKHIEFICSHQSTWLASEDLLSEQKLIIPIVDASEISLFNKKRLVRRSILKKNSFG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01622 208 PANTHER EXOCYST COMPLEX PROTEIN EXO70 17 173 IPR004140 GO:0000145|GO:0006887
Pumo9g01622 208 SUPERFAMILY Cullin repeat-like 16 171 IPR016159 -
Pumo9g01622 208 Gene3D Exocyst complex component Exo70 1 181 - -
Pumo9g01622 208 Coils Coil 55 75 - -
Pumo9g01622 208 Pfam Exo70 exocyst complex subunit 20 175 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01622 Pumo-Chr9 44638564 44639190 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01622 20 131 EXO70 exocyst subunit family AT5G03540 33.333 4.69e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01622 K07195 - gmx:100788866 158.303