Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01616 ATGAAAATTAAATTGTGGTTGGTCATTGTTGGAGGGGGTTTCAGTTATTCTCTCATCATTCTTCGATCTACTTTGGATCCTCGAACAAATGAGTATCATGGACTCCAAGAGGACCCAGACCCAGACATTGAAATTGGTCTGCATCCACCATCACAAGGAACCAGTGGTAACGCTTCTCAAGTGCCTTCACCCCAAGCTATTGGTAATGCTCATCCACGAGATGATGCTACTCAGGTCACCCAAGTTGCTTCAAGTCCACCACAAGGCAAGAGTGATAGAGGTCTTATCAGGGCCCAGTATATGAGCCATATAGAGGAGCTTAAGAAGGAGAATGGGAAGCTTATCGACACAATTTCCAAGCATGTCGGCGAATATCTTATGGCTAATGTTTTGAAAGAAGACCAGATTCCAGTGCCGGAAATGCAAGCAGATGACAACTTGGTGGCAGATGTGTTGCCGCAGGGAATCATCAACAACCTTCGTGAAACAGGGATGCTCATGTTTCAGAATGAGTGCTGCAATGTGTACAGCAGTTGCCGGAGGGAGTTTCTGAAAGAGTGCCTATCAAAATTTGGGTTGCAAGTTGAAGAGCTCAACATGGAGGACATTGACCAGATGGAGAAGATTGAGAGTTGGATAAAAGCTTTGAACATATCTGTGAGGATACTCTTTCCCAATGAAAGGAGACTCTGCGATCTCGTCTTCTCATCATCTTTTGCTGCGGAGATGGCTTTTGCTGAGGTTTGCAAGGAATTGACTATTAGTCTACTCAGATTCGCGAATACCTTAGCAACTGAGAATCATTCGCATTCGCCATATATCCCCAACGTGTTCAAGACTTTGGGTGACATGATTCCAAATTTCAATTCACTGTTTTATGGACAGGTGTTCAGTGAATCAATCAGAAATGGCGCGGTCCTTGTTGGGAAGAGATTGGGCATTTTTGTGGAGTTGGAGAATCTTATTCACCGTGAGGTAGCGAAGGAGACTGTTCCAGACGGCGGGATTCATCCAACTACCCACAAAGTGATGGACTACCTCAGAGATGTTTTTACAAATAATGAGAGTTTTTCAATTAGAAGGGGAATATCTTCATTTTCAGACCAGGTAACCAAGATAATACAGGTGTTAGACAGCAATTTGGAAGCCAAGTCTAAAAACTACACAGACCCTGCATTGGGCCATGTTTTCATGATAAATAATCTGATGCTTTTACAGTATGGGGAGTATATATATGGAGTCATTTTTGGCGAAGATTGGTACAAATCAAAGATCAACCAACACATTGAACTCTATCAAAGAAGCTCATGGGATAAGATATTGGACTTTTTGAATCTAGACAGCAATGAGTTGTTACTAGCAGAGTCAATGAAAAACAAGCTCAAATTGTTCAACCAGCACTTCAACAAGATATGCAAAGCTCAGTCTGAATGGTCTATCTTTGATGAGCAGCTAAGGAAACAGATGATAAAATCCATAGAAAACGTATTGTTGCCAGCGTATGGAACCTTTCTTGGAAGGATTCATGATGTTCTTGGTAAGGATGCTAATGACTTCATTAGGTATGGAATGCAGAACATTCAAGATCGACTGAGCGGTTTGTTTCCTGTAAGCATTACATGA 1623 0.4196 MKIKLWLVIVGGGFSYSLIILRSTLDPRTNEYHGLQEDPDPDIEIGLHPPSQGTSGNASQVPSPQAIGNAHPRDDATQVTQVASSPPQGKSDRGLIRAQYMSHIEELKKENGKLIDTISKHVGEYLMANVLKEDQIPVPEMQADDNLVADVLPQGIINNLRETGMLMFQNECCNVYSSCRREFLKECLSKFGLQVEELNMEDIDQMEKIESWIKALNISVRILFPNERRLCDLVFSSSFAAEMAFAEVCKELTISLLRFANTLATENHSHSPYIPNVFKTLGDMIPNFNSLFYGQVFSESIRNGAVLVGKRLGIFVELENLIHREVAKETVPDGGIHPTTHKVMDYLRDVFTNNESFSIRRGISSFSDQVTKIIQVLDSNLEAKSKNYTDPALGHVFMINNLMLLQYGEYIYGVIFGEDWYKSKINQHIELYQRSSWDKILDFLNLDSNELLLAESMKNKLKLFNQHFNKICKAQSEWSIFDEQLRKQMIKSIENVLLPAYGTFLGRIHDVLGKDANDFIRYGMQNIQDRLSGLFPVSIT 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01616 540 Pfam Exo70 exocyst complex subunit 211 532 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo9g01616 540 Gene3D Exocyst complex component Exo70 80 538 - -
Pumo9g01616 540 MobiDBLite consensus disorder prediction 31 93 - -
Pumo9g01616 540 SUPERFAMILY Cullin repeat-like 99 535 IPR016159 -
Pumo9g01616 540 MobiDBLite consensus disorder prediction 50 66 - -
Pumo9g01616 540 PANTHER EXOCYST COMPLEX PROTEIN EXO70 145 535 IPR004140 GO:0000145|GO:0006887
Pumo9g01616 540 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01616 Pumo-Chr9 44562111 44564572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01616 135 540 EXO70 exocyst subunit family AT5G58430 42.129 4.21e-102 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01616 - K07195 gmx:100816208 862.448