Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01613 ATGAACACCGAGACCATAATTATACACCGATACATGAGGGTCATTGAAATGGATTGCCAGGGTTGGTTTACACGAGAACCTCATCCTAGCGTTACTGTCAAGGCAGGGTTCATGGGTTGTATAGATGCGCTTAAGGAGGAGAACGGGAGTGTCATCGCCACAATTTCCAAGCATGTAGACGAATACCTTAAAGTTAAAGCTAATGTTATCGATGAGTTCCAGATTTCAGTGCCAGATTTGCAATGCGACGACAACTTGTTGATGGATGTGTTGCCGGAGGAAATTGTCAACAACCTTCATCAAAGCATAAAGCCGATGGTGTTAGAAGGGTTTAAGAATGAATGCTTACAGGTGTACACTAATTGCCGGAGGGATTTTCTGAAAGAGACTCTATCCACATTCGGGTTGCAATTTCAAGAGCTTAACATGGAGGACATTGACAAGATGGAGAAGGTTGAGAGTTGGATAAAAGCTTTGAACGTGGCCGTGAAGTTACTCTTTCCTAATGAAAGAGAACTCTGCGATCGTGTCTTCAGAGGCTCCATTTCCTCTAGGGAGTCTGCTTTCATGGAGGTTTGCACAGAATTGGCGACTAGTCTACTGAGCACTGCCAAGGCTGTGGCAACTTGGGGCCATTTCATGCCCTTGACATCGCAGGGGCTGATACAAGAGTTCAAATCAGTGCTTTTAAATGAGCATTGTAAATCACTCAGAGTTAATGCAGCGAAGCTGATTAGGCTGAGATTGAGCATTTTTGAGGCGTTGGAAAATGTATCACTTGTTCCCGGTGGCGGGCTTCACCCTGTTACCCTTAATGTGATAAGGTACGTTAGTTATGGTCACCCAGGCTGGCTAACTCATCCGATTACTCGATCGCAGCCTGTGTACATTGCCAGGATGACAGAGCTGTTAGAGAGCAGTTTGGAAGCCAACTCCAAAAACTACAATAACCCTACTCTGGCTAATGTTTTCATCATGAACAATCGGAGGTTCATCGAACTAAAGGCAAAACTGAATGAATTGGGATCTATTTTTGGCGATGATTGGCTCCAAAATAACGCAACAAAATTCCAACAAAACCTTCAACTCTATCTGAGCAGCTCATGGAATAAGATTCTGGACTTTTTGAAGCTGGACATCAATGAGTCAGAGCCTAATGTTGTGGAGGAGTTAATGATACACAAACTCTTTTGGTTCAACGAACACTTTTTTGAGACATGCAACGTTCAGTCTGAGTGGGTTATCTTTGATGAGCAGTTAAGGAAAGAAATAATAAAATCCATAAAAGACATGTTGTTGCCAGCATATGGAAAGTTCGTTGGGAGGTTTCAGGAATTTCTTGGTAAGCACACTTATGAGCACATTAAGTATGGAATGCTTCAAGTTGAAGATCGACTCGTCAATTTGTTTCTTGTAAGTGCCCCGGATGAGAAGACATGGGAAAAATACCAGAGTTTGAGGCATAGATTTGAATAA 1476 0.4268 MNTETIIIHRYMRVIEMDCQGWFTREPHPSVTVKAGFMGCIDALKEENGSVIATISKHVDEYLKVKANVIDEFQISVPDLQCDDNLLMDVLPEEIVNNLHQSIKPMVLEGFKNECLQVYTNCRRDFLKETLSTFGLQFQELNMEDIDKMEKVESWIKALNVAVKLLFPNERELCDRVFRGSISSRESAFMEVCTELATSLLSTAKAVATWGHFMPLTSQGLIQEFKSVLLNEHCKSLRVNAAKLIRLRLSIFEALENVSLVPGGGLHPVTLNVIRYVSYGHPGWLTHPITRSQPVYIARMTELLESSLEANSKNYNNPTLANVFIMNNRRFIELKAKLNELGSIFGDDWLQNNATKFQQNLQLYLSSSWNKILDFLKLDINESEPNVVEELMIHKLFWFNEHFFETCNVQSEWVIFDEQLRKEIIKSIKDMLLPAYGKFVGRFQEFLGKHTYEHIKYGMLQVEDRLVNLFLVSAPDEKTWEKYQSLRHRFE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01613 491 PANTHER EXOCYST COMPLEX PROTEIN EXO70 87 470 IPR004140 GO:0000145|GO:0006887
Pumo9g01613 491 Pfam Exo70 exocyst complex subunit 295 466 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo9g01613 491 Pfam Exo70 exocyst complex subunit 154 278 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo9g01613 491 SUPERFAMILY Cullin repeat-like 74 470 IPR016159 -
Pumo9g01613 491 Gene3D Exocyst complex component Exo70 33 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01613 Pumo-Chr9 44528273 44530615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01613 71 470 EXO70 exocyst subunit family AT5G58430 40.135 2.29e-86 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01613 - K07195 ccaj:109807809 509.605