Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01609 ATGCCGCCGCGCACGCCGCCTCCGGCATCTGCTGCCACCGTGGCCAGCGACGCGGTGTTCACGCCGATGGACATGGTGAAGCAGAGGCTGCAGCTGGGGAACAGCGGGTACAAGGGGGTTTGGGACTGCGTGAAGAGGGTCATGAACGAGGAGGGGTTTGGGGCGTTCTATGCGTCTTATAGGACCACTGTGTTGATGAATGCGCCTTTCACTGCGGTGCATTTTGCGACGTATGAGGCCGCGAAACGCGGCCTCATGGAGGTTTCTCCGGAGAGTGTTGATGATGAGAGGTTGGTTGTGCACGCCACTGCTGGGGCTGCTGCCGGGGCTTTGGCTGCTTCGGTTACGACTCCGCTTGATGTTGTCAAAACTCAATTGCAGTGTCAGGGTGTCTGTGGTTGTGATAGGTTCAAAAGTGGATCAATTGGGGATGTTATTAAAACAATAGTGAAAAAAGATGGATACAGAGGGCTCATGCGAGGATGGATTCCAAGGATGCTCTTTCATGCTCCAGCAGCTGCTATTTGCTGGTCTACATATGAAGCTGGAAAATCCTTTTTCCAGGATTTCAATCAGCAGAAAGACACTGGCACTGTTACCTAA 603 0.5323 MPPRTPPPASAATVASDAVFTPMDMVKQRLQLGNSGYKGVWDCVKRVMNEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVDDERLVVHATAGAAAGALAASVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQDFNQQKDTGTVT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01609 200 FunFam Mitochondrial RNA-splicing protein MRS3 35 198 - -
Pumo9g01609 200 Gene3D Mitochondrial carrier domain 9 200 IPR023395 -
Pumo9g01609 200 PANTHER MITOFERRIN-1-RELATED 10 190 - -
Pumo9g01609 200 Pfam Mitochondrial carrier protein 10 87 IPR018108 -
Pumo9g01609 200 Pfam Mitochondrial carrier protein 97 189 IPR018108 -
Pumo9g01609 200 SUPERFAMILY Mitochondrial carrier 10 181 IPR023395 -
Pumo9g01609 200 ProSiteProfiles Solute carrier (Solcar) repeat profile. 3 84 IPR018108 -
Pumo9g01609 200 ProSiteProfiles Solute carrier (Solcar) repeat profile. 96 186 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01609 Pumo-Chr9 44427234 44430803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01609 12 196 Chloroplast and Mitochondria Gene Families AT1G07030 81.183 9.37e-104 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01609 K15113 - gmx:100802640 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01609 9 44427234 44430803 Pumo9g01609 9 44427234 44430803 ECH