Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01599 ATGGGATGCACTTCACTGCTTAGAAGCCCCAAGAAAGAAGAACAAGAAGTACCAGATGCCATCACCTCTAACCAACCTTATACCTATGAAGATTTCAATATTTTGGACGAACTCGAAGGGGTCTTGAACGCCAAGGAAGAACAAGAGTCGTTGCCACAACAAAACTCCTCTAGTGGTGAAGTACAACTCCATTGGGATTTCATGGAATGGGAGGAGTTTCATCCCCCCAATATTGGAGAGGAAGGAGAGGATGAAAATGAAGGAAAATTAGAGCAGGTAAGAGAGAACATGACCAAATGCCTCTTTGAGGAGCAAGAGATAAAGAGAGAAAACAATATTGTTGGGTTTTGGGAAGTGGATGATGAGAAGATGGTGGCTTTGAATTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTGATCGAGGGTCTCTATGGGCTGATGATTGTTCTCTTCCATTGGCCACCAATAATGGCTACTATATGGGAGAAGTGCCAGTATTGGAAGAAGAAAGAGCAAGAAGGGAAGCGAGTGTTCTTAGGTACAAAGAGAAGCGTCAGAACCGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGTTCACTTTTTAAATTTCCCTGTTTCTTTTTCGTGCCATTGGGTATGGTCATTTTGTTTTGTAATGAAAGCAGCTTTTCCGATATTTTTGTTGTAG 732 0.4112 MGCTSLLRSPKKEEQEVPDAITSNQPYTYEDFNILDELEGVLNAKEEQESLPQQNSSSGEVQLHWDFMEWEEFHPPNIGEEGEDENEGKLEQVRENMTKCLFEEQEIKRENNIVGFWEVDDEKMVALNLNLNYQEVLDAWSDRGSLWADDCSLPLATNNGYYMGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKVHFLNFPVSFSCHWVWSFCFVMKAAFPIFLL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01599 243 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 41 217 - -
Pumo9g01599 243 MobiDBLite consensus disorder prediction 1 28 - -
Pumo9g01599 243 ProSiteProfiles CCT domain profile. 176 218 IPR010402 GO:0005515
Pumo9g01599 243 Pfam CCT motif 176 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01599 Pumo-Chr9 44217967 44219460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01599 120 216 C2C2-CO-like Transcription Factor Family AT1G73870 43.103 1.13e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo9g01599 CCT 8.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01599 - - gsj:114384259 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01599 9 44217967 44219460 Pumo9g01599 9 44217967 44219460 ECH