Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01594 ATGGAGAAGGTGGTGTGTGTAACCGGCGGCAGCGGCTGCATTGGTTCATGGCTCGTCCATCTCCTCTTGGATCGCGGCTACACCGTTCACGCCACCGTCCAAAACCTCAACGATGAAGCCGAGACGAAGCATCTAGAAGCCTTGGAAGGAGCGTCCACGCGCCTTCGCCTCTTCCAGATGGATCTCCTCCGCTACGACACCGTCCTCGCCGCCGTGCGCGGCTGCGCCGGCGTCTTCCACCTCGCCTCGCCCTGCATTGTCGACCAAGTCCACGACCCCCAGAAGGAGCTTCTGGACCCGGCGATCAAGGGAACCATGAACGTGCTCACGGCGGCGAAGGAAGCAGGGGGGCGGCGCGTGGTGCTCACGTCCTCCGTCTCCGCGATTACGCCGAGCCCCAACTGGCCCGGCGATGTCGCCAAGACGGAGGAGTGCTGGATCGACGTTGAATATTGCAAGCAAAAAGGGGTTAGAAAGGGTTTTCAATTTTTCACTTTTTTTTTTCTGGTGTGCGCGTTAAGTGTTTGTGTTTTTGTGTGTGTGGAACAGTTGTGGTATCCGTTGTCGAAGACTTTGGCTGAGAAAGCTGCTTGGGATTTTGCTAAAGAGAATGGGTTGGATGTTGTGGTGGTGAATCCTGGCACTGTGATGGGTCCTGTTATTCCACCAAGGCTTAATGCAAGCATGGTCATGCTCGTGCGTCTTCTTCAAGGCTGTGCTGAAACATATGAGGACTTCTTTATGGGATCGGTCCACTTTAAGGATGTAGCATTGGCACATATTTTGGTGTATGAGAACAAATCAGCAGCTGGTAGGCATTTGTGTGTTGAAGCTATCTCTCACTATGGTGATTTTGTGGCAAAAGTTGCTGAACTCTATCCAGAGTATAATGTGCCTAAGATGCAACGAGATACCCAACCGGGATTATTGAGGACAAAGGATGGAGGAAAGAAACTTATGGATTTGGGTTTGCAATTCATTCCAATGGAGAAGATTATTAAGGATGCTGTAGAGGATTTGAAGAGCAAAGGGTTCCTTTCTTAA 1044 0.5134 MEKVVCVTGGSGCIGSWLVHLLLDRGYTVHATVQNLNDEAETKHLEALEGASTRLRLFQMDLLRYDTVLAAVRGCAGVFHLASPCIVDQVHDPQKELLDPAIKGTMNVLTAAKEAGGRRVVLTSSVSAITPSPNWPGDVAKTEECWIDVEYCKQKGVRKGFQFFTFFFLVCALSVCVFVCVEQLWYPLSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMVMLVRLLQGCAETYEDFFMGSVHFKDVALAHILVYENKSAAGRHLCVEAISHYGDFVAKVAELYPEYNVPKMQRDTQPGLLRTKDGGKKLMDLGLQFIPMEKIIKDAVEDLKSKGFLS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01594 347 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 337 - -
Pumo9g01594 347 Gene3D - 1 347 - -
Pumo9g01594 347 Pfam NAD dependent epimerase/dehydratase family 5 133 IPR001509 -
Pumo9g01594 347 CDD FR_SDR_e 5 324 - -
Pumo9g01594 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 340 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01594 Pumo-Chr9 44163815 44166507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01594 3 347 Monolignol Biosynthesis Gene Families AT5G58490 73.043 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01594 - - gmx:100803241 619.002