Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01582 ATGGCACAAGCGTGGACACCGTTCACTCCGTTGAAGTTGCTGCTGGCGCCGCTGTTAACTCTGTTTTTCGCGTTGAGCCAGAAACAGAGTCTCTGTTCCACGCTCAAGAACAACGAAGAAGGTTTGGCGCTGCTGGCGTTGAGGGAGAGAGTGGTGAGTGACCCGCAGGGGGCTTTATCAAGTTGGAGTGGTGGCGAAGATGGAGACATTGATCCATGCTCGTGGTTCGGTCTGGAGTGTTCTTCTCACGGTAATGTTGTGACCTTGAATTTAAAAGACCTTTGTCTAGAAGGAACACTAGCACCAGAAATTGGAAAGCTGGCTCACATAAAATCAATCATTTTGCGCAACAATTCTTTCTTTGGAGAAATTCCCAATGAGATACTACACTTAGAGGAGTTGGAAGTCCTTGACTTGGGATATAACAACTTTAGTGGTTCACTTCCATTTGACCATGGCAATATGCCATCCTTGATCACTCTTTTATTGGACAACAATTACTATCTAGCCAACTTAACCCCAGAGCTGTATAAGCTCAAGATGAATTCTGAATTTCATGCTAATGAAGAACAACTATCTGGTGCCACCACTAGAGAAGCATTTGTTGGCAGATGTAGTTTATGGCACGTTGGCCGACATGGGGATAGATCATACAGGAGGCAACTTCTCAAGGTAGCAAATGATGCTAATACACCCAGAATACAAGGGGATGTTAACCGAGGAACACTTAAACAATCAGCATCACATCTTCCTTTTTCATTACCACCAGATTTTGAGCCTTTCTCATTATCACCATCAGAAAGTCCTTCATATTCACCAGGACCAGCTCCACTATCATATTCGCCATCGCCATCTCCCTCCAGTATTTTTTTCACTCCTTCACCCTCTCCTTCATCTGTAGTGTTACCAACACCAGACACATCACCCCCAGCAAACACACCTCTCACTGTGTCTAGACCACCAGAGTTTAATTGGGTTTCAGCACCTAGCCCTTCTCCATTTTCTAACCAAGGAAACACGTACAGTTCCAATCAAATACATCATTCGGCGATAATCTGGTCTGCAGTTGGGGGCTTCTCCTTATTGATTTTGGTGTCAGCCATTACTTTTGCTTGCTTCCGAAGTAGGAAGGTTGTGGCTGTTAAACCTTGGTCCACAGGGTTGAGTGGCCAGCTGCAGAAAGCTTTTGTAAAAGGTGTGCCAAGTCTCAAACGAGGAGAAATTGAAGCAGCTTGTGAATATTTCAGCAACATTATTGGTTCTCTTCCTGATGGAACTGTGTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGCATCCTCTGCAGTGACCACAGCTCAAAACTGGTCAAAAAGTATGGAAGCTCTATTCCGAAAGAAGATTGCGACATTATCTAGAGTGAACCACAAGAATTTTGTGAATCTTATTGGGTATTGTGAAGAGAATAAGCCATTCTCAAGAATGATGGTGTTTGAGTACGCTCCAAATGGAACACTCTTTGAGCATGTACACATTAGAGAAGCAGAAGAACTAAATTGGACAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGCCTAGAGTACATGCATGAGCTGAAACCACCCATTGCCCATAGGAACCTGCAATCTTCCTTTATATACCTTACTGAAGATTATGCTGCCAAAATATCAGATCTTAGTTTATGGAATGACATGTGTGCTACAAAGAATGGGTCTGCAACACAACTCTTGGAAACATCATCAGCAGATACCAAGGACAATGTTTACAGTTTTGGAATAATATTGTTTGAGTTGATTACAGCGAGAATTCCCCTTGCTGGGAACAGTGAAGTTCTGGCGGATTGGGCAGCAGAATATGTAAGGTGGGGGAAATCCTTAAGAGATGTTGTGGATCCAAGACTGAACTCTTTGCAGGAAGAAGAGATTGAGGAATGGTCTGAAGTGATAAGAAATTGTGTACAACCAGATTCAGAGAATAGGCCAACTATGAAAGAAGTTACATCTAGACTCAAGGAAATCACAGCCATGGGGCCTGATGGAGCAAATCCAAAAGCATCACCACTTTGGTGGGCAGAAATGGCAATTACGTCCACTGATTCAAGTTGA 2115 0.4345 MAQAWTPFTPLKLLLAPLLTLFFALSQKQSLCSTLKNNEEGLALLALRERVVSDPQGALSSWSGGEDGDIDPCSWFGLECSSHGNVVTLNLKDLCLEGTLAPEIGKLAHIKSIILRNNSFFGEIPNEILHLEELEVLDLGYNNFSGSLPFDHGNMPSLITLLLDNNYYLANLTPELYKLKMNSEFHANEEQLSGATTREAFVGRCSLWHVGRHGDRSYRRQLLKVANDANTPRIQGDVNRGTLKQSASHLPFSLPPDFEPFSLSPSESPSYSPGPAPLSYSPSPSPSSIFFTPSPSPSSVVLPTPDTSPPANTPLTVSRPPEFNWVSAPSPSPFSNQGNTYSSNQIHHSAIIWSAVGGFSLLILVSAITFACFRSRKVVAVKPWSTGLSGQLQKAFVKGVPSLKRGEIEAACEYFSNIIGSLPDGTVYKGTLSSGVEIAVASSAVTTAQNWSKSMEALFRKKIATLSRVNHKNFVNLIGYCEENKPFSRMMVFEYAPNGTLFEHVHIREAEELNWTMRMRIAMGIAYCLEYMHELKPPIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCATKNGSATQLLETSSADTKDNVYSFGIILFELITARIPLAGNSEVLADWAAEYVRWGKSLRDVVDPRLNSLQEEEIEEWSEVIRNCVQPDSENRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMAITSTDSS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01582 704 Gene3D Transferase(Phosphotransferase) domain 1 496 683 - -
Pumo9g01582 704 PANTHER PROTEIN MALE DISCOVERER 2 16 701 - -
Pumo9g01582 704 MobiDBLite consensus disorder prediction 298 316 - -
Pumo9g01582 704 Gene3D Ribonuclease Inhibitor 36 230 IPR032675 -
Pumo9g01582 704 ProSiteProfiles Protein kinase domain profile. 413 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01582 704 FunFam Inactive receptor-like serine/threonine-protein kinase 387 495 - -
Pumo9g01582 704 SUPERFAMILY L domain-like 50 181 - -
Pumo9g01582 704 FunFam Nuclear pore complex protein NUP107 37 198 - -
Pumo9g01582 704 Pfam Protein tyrosine and serine/threonine kinase 418 673 IPR001245 GO:0004672|GO:0006468
Pumo9g01582 704 Gene3D Phosphorylase Kinase; domain 1 385 495 - -
Pumo9g01582 704 Pfam Leucine rich repeat N-terminal domain 37 81 IPR013210 -
Pumo9g01582 704 MobiDBLite consensus disorder prediction 298 319 - -
Pumo9g01582 704 SUPERFAMILY Protein kinase-like (PK-like) 407 673 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01582 Pumo-Chr9 43983360 43990264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01582 38 676 Receptor kinase-like Gene Family AT1G25320 24.896 5.67e-44 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pumo9g01582 PK_Tyr_Ser-Thr 5.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01582 - - gmx:100779427 1122.46