Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01580 ATGGGAGACCTTAAGATTAGAGGTGACATAGTAGAAGAGCAATTATGGCCAAAGAAACCCACTCTAATTAAGCCTATTCCTCGAAGAGCTCAAGCTAATGTACCTATAGGCGTTGTTGGTTCATCCTTTCAACCATGGCAAAGACCCTCCAAGACACTTCATATGCTTGCCACCATTCCAGAAAATGAAAATCATCTTATGGAGGAAAACACTGCTGATGGAAGTGGCACAACTTTTGGTGATGCTAATGATCAGAACAATTCCAATGAAGCCCAAGCAAACATTGACCCAGAAATGGAGAGGAAGTTTAAGCGAATCATCTCAAACCGGCATTCTGCAAGAAGATCAAGATTGAAGAAACTTACATACACGGCGGAGTTGGAAAACAAAGCGAAATCTTACGAGAACAACATAGGCTTCCTCCATGGACAAATTGCAGCCCAACAAAACCAGCAGCGGTTGTTGCAAATTGAGCATCATACATTGAAATTCCATATGGCTGCTCGTGAAAAGCAAAGATTACTTCAAGAAGATGAGATTGAAAAGAACAGAGCAGAAGTGGATAGGCTAAGTGAAGTTCAAAGGAAATTAGCAGCTGAAGCTCAATCAAGGAGAATGCTTAATTTCACTTCTTTGCAGCTCTAG 645 0.4124 MGDLKIRGDIVEEQLWPKKPTLIKPIPRRAQANVPIGVVGSSFQPWQRPSKTLHMLATIPENENHLMEENTADGSGTTFGDANDQNNSNEAQANIDPEMERKFKRIISNRHSARRSRLKKLTYTAELENKAKSYENNIGFLHGQIAAQQNQQRLLQIEHHTLKFHMAAREKQRLLQEDEIEKNRAEVDRLSEVQRKLAAEAQSRRMLNFTSLQL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01580 214 Pfam bZIP transcription factor 101 136 IPR004827 GO:0003700|GO:0006355
Pumo9g01580 214 PANTHER BASIC LEUCINE ZIPPER 34 71 200 - -
Pumo9g01580 214 SUPERFAMILY Leucine zipper domain 101 155 IPR046347 GO:0003700|GO:0006355
Pumo9g01580 214 Coils Coil 168 200 - -
Pumo9g01580 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 119 IPR004827 GO:0003700|GO:0006355
Pumo9g01580 214 MobiDBLite consensus disorder prediction 72 92 - -
Pumo9g01580 214 Gene3D - 99 167 - -
Pumo9g01580 214 SMART brlzneu 97 161 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01580 86 177 bZIP Transcription Factor Family AT2G42380 35.106 3.18e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo9g01580 bZIP_1 8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01580 - - ccaj:109816036 274.248