Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01569 ATGGCTTCGTCTTCGTGGGTGAGAGGCAAGTGCGTCGGTAAGGGCGCGTTTGGGGTTGTCAACGTGGCGGTTTCGAGAATTGATGGTCGCGTCTTCGCGGTGAAGTCCGTGGATTGTAAGACGGGGTTGCGGGGTCAGGTGGAGGCGTTGGAGAACGAGATTGGGATTCTGAAGCGTGTGGCTTCTTCGCCGCACGTGGTGGCTTATCTCGGCGACGATGTCACGTGCGAGGGTGGGGGTGGTTTCGGAACTGCGTCGTTCAGGAACCTTCATTTGGAGTACATGCCAGGTGGCACCGTCGCTGAGCTGGACCGTCATCGCGCTGACGTGGACGAGCGGTTAGTGAGGCGCTACGCGTGGTGCCTCGCGAGCGCGCTGCGTGACGTCCACGCGCAGGGGTTCGTGCACTGCGACGTGAAGGGGAGGAACGTGCTTCTCTCCGGCGACGCAAAAATCGCGAAGCTCGCCGACTTCGGCGCGGCGGTGGAGTTCGCCGGCGAGGGCGAAGCCTCGCCGGCGATATTGCCGCGGGGGAGTCCGATGTGGATGGCGCCAGAGGTGGTTCGCCGGGAGCGGCAGGGGCCGGAGTCCGACGTGTGGTCGCTCGGATGCACGGTGATCGAGATTGTCACCGGGAAGCCGGCGTGGGAGGATCGCGGCGTCGACACGCTGAGTCGAATCGGTTACTCGGACGAGTTGCCGGAGTTTCCGAGCGAGTTGTCGGAGTTAGGGAAGGATTTTCTCGAGAAGTGTCTCAGAAGAGAACCGAGTGAACGGTGGAGCTGCGATCAGCTGCTGCAGCATCCATTTTTGCTTCCCTACACCACCGTAGCTGAATCGTCGCCTCGGTGCGTTATCGACTGGGTTGACTCGGAGTTCGCCGAGTCAGACAACGAGCGTGATCATGAAGAAGTGTTTTTAAAATTTAACAGCGAAGAAAATTCAGTTAAAAATAGGATTAGTAAATTAGCGACAGATTCGAGGGTAAATTGGGAAACACAGGGTTGGGTAGTGGTGAGGGAAGTTGAGTCCAACGGAGAACCAACGACAACGGGAACAGAAGAAGGTGCGTGTGATGATGGTGTTGCTTCGAACAAAGAAGGGGAAAATTGGAAATTTAGTAATGTGGTGGCAGGGACTGGTTTGGAATATTCGGATTCTGAAGGGGTAAATCGGGAATTACGAAAGTTTGGTGGGAGTAACACCGCTGGAGGGGGTGGTGGTTGGAGCTGTCGGTATGGGTATGGGTGGAAAAAGTTGGGTAGGATTACAGGAATACTCAGTATTTACAGCTTGTATTGTAAAAATTTCATGTGGTGTAATTTATTATTCTTAATGTATTTCAATATATTATGCTTTTCGATTATTATTTATGGTGTTTACCTTTTACTGCACGTGACTGAAAAGTGGGGCTCTGTGGAAAAGATTAGGGATGTGAAAAAATTAATTGGAAAGGTGTTTGTTTGCAATTGA 1473 0.5309 MASSSWVRGKCVGKGAFGVVNVAVSRIDGRVFAVKSVDCKTGLRGQVEALENEIGILKRVASSPHVVAYLGDDVTCEGGGGFGTASFRNLHLEYMPGGTVAELDRHRADVDERLVRRYAWCLASALRDVHAQGFVHCDVKGRNVLLSGDAKIAKLADFGAAVEFAGEGEASPAILPRGSPMWMAPEVVRRERQGPESDVWSLGCTVIEIVTGKPAWEDRGVDTLSRIGYSDELPEFPSELSELGKDFLEKCLRREPSERWSCDQLLQHPFLLPYTTVAESSPRCVIDWVDSEFAESDNERDHEEVFLKFNSEENSVKNRISKLATDSRVNWETQGWVVVREVESNGEPTTTGTEEGACDDGVASNKEGENWKFSNVVAGTGLEYSDSEGVNRELRKFGGSNTAGGGGGWSCRYGYGWKKLGRITGILSIYSLYCKNFMWCNLLFLMYFNILCFSIIIYGVYLLLHVTEKWGSVEKIRDVKKLIGKVFVCN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01569 490 FunFam Serine threonine protein kinase putative 4 324 - -
Pumo9g01569 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Pumo9g01569 490 ProSiteProfiles Protein kinase domain profile. 6 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01569 490 Gene3D Transferase(Phosphotransferase) domain 1 3 350 - -
Pumo9g01569 490 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Pumo9g01569 490 SUPERFAMILY Protein kinase-like (PK-like) 4 303 IPR011009 -
Pumo9g01569 490 Pfam Protein kinase domain 8 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01569 490 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 347 - -
Pumo9g01569 490 SMART serkin_6 6 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01569 490 CDD STKc_MAPKKK 5 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01569 Pumo-Chr9 43819779 43821765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01569 3 350 MAP Kinase Kinase Kinase AT1G07150 56.091 2.43e-127 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo9g01569 Pkinase 6.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01569 - - gmx:100776227 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01569 9 43819779 43821765 Pumo9g01569 9 43819779 43821765 ECH
Pumo1g00620 1 9446330 9448010 Pumo9g01569 9 43819779 43821765 PCT