Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01545 ATGCACATGAGCATCTACTCTGAAGCCACCACATCACAAGCAATGCCACCCACCATGGATGAAGATTTGGAGAACAGCACAGAGGCTTGCAACAATGCAATGACTCCAATGGTGAGAAAGAAATCAGAACTAGCTGTGGTCACAAATAGTAACTCTCGTTTCCAAATGCTTAGGAATTTCATGACCAATTTGCAAGAGGTCATCTTCGGCACTAAGCTTGTGGTGCTTTTTCCAGCAGTCCCTTTAGCTGTTGTTGCAGATTTTTATAGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTTCTTGGACTTGCTCCACTAGCCGAACGTGTCAGCTTCTTGACTGAGCAAATTGCATATTTTACCGGCCCAACAGTTGGAGGGCTTCTGAATGCAACTTGTGGAAATGCAACCGAGATGATCATAGCATTATTTGCACTTCACCAGAACAAAGTAAATGTTGTGAAGTTATCCTTGCTGGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGCAGTTCACTACTCTGTGGTGGTTTAGCCAATCTCAAGAGAGAACAAAGATATGACAGAAAACAGGCTGATGTAAACTCACTGCTTTTGTTGCTGGGGTTGCTGTGCCATTTGCTGCCATTGCTGTTCAAATATGCCTTAGGAGGGGGCGATCATTCTGTAGCCACTAGCACTCTTGAGTTGTCCAGAGCAAGCAGCGTTGTTATGCTTCTAGCTTACGTTGCTTACATCGTCTTCCAATTAAAAACCCATCGAAAATTGTTTGATGCACAAGAGGTGGACGACGATGAAGAGAAGGCAGTGATAGGATTTTGGAGTGCATTTACCTGGTTGGTGGGTATGACATTGGTCATATCTGTACTTTCTGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCATGGGGCATTTCTGTAAGCTTCATTAGCATAATTTTGCTACCAATTGTTGGAAATGCCGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTAGTTGTTGCATGGATAATGGGTATAAAAATGGATTTGGACTTCAGTCTTCTTGAAACTGGATGTCTTGCTTTTACAATTATAATTACAGCTTTCACTTTACAGGATGGAACTTCACACTACTTGAAAGGAGTGGTGCTTACTCTATGTTACATTGTCATTGGTGCATGTTTTTTTGTTCTCAAAACTCCTCTAGTCGGGCAATCTCCTAGCTCCAATTTTGGAGCTAAACCATCCTTTGAAGCAATCACCACTTGA 1344 0.4211 MHMSIYSEATTSQAMPPTMDEDLENSTEACNNAMTPMVRKKSELAVVTNSNSRFQMLRNFMTNLQEVIFGTKLVVLFPAVPLAVVADFYSFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALFALHQNKVNVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYALGGGDHSVATSTLELSRASSVVMLLAYVAYIVFQLKTHRKLFDAQEVDDDEEKAVIGFWSAFTWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIKMDLDFSLLETGCLAFTIIITAFTLQDGTSHYLKGVVLTLCYIVIGACFFVLKTPLVGQSPSSNFGAKPSFEAITT 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01545 447 Gene3D - 273 421 IPR044880 -
Pumo9g01545 447 Gene3D - 124 272 IPR044880 -
Pumo9g01545 447 FunFam Vacuolar cation/proton exchanger 124 267 - -
Pumo9g01545 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 33 424 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pumo9g01545 447 NCBIfam calcium/proton exchanger 59 421 - -
Pumo9g01545 447 Pfam Sodium/calcium exchanger protein 95 252 IPR004837 GO:0016020|GO:0055085
Pumo9g01545 447 Pfam Sodium/calcium exchanger protein 278 416 IPR004837 GO:0016020|GO:0055085
Pumo9g01545 447 NCBIfam calcium/proton exchanger 78 421 IPR004798 GO:0006816|GO:0015369
Pumo9g01545 447 MobiDBLite consensus disorder prediction 1 24 - -
Pumo9g01545 447 FunFam Vacuolar cation/proton exchanger 268 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01545 Pumo-Chr9 43492786 43497244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01545 31 426 Antiporters AT2G38170 67.160 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01545 K07300 - gmx:100802344 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00648 1 9791832 9796324 Pumo9g01545 9 43492786 43497244 PCT