Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01530 ATGTCCGATGTTTTTGACAAAATTGAACGTGTCAATTCTGATAAGCAGACTTGGAGGCTTAAAGTTCGAGTTATTAGACTATGGGAAATGTGTCCAAAATTGAAGCCTAGTGAGCCTTATGCCATAGAAATGGTTTTCATTGATTCTGATGGAAACAAAATTCAAGCAACTGCGAGGAAGGTTGTGATGCATCAATTCAAGAATGCTATTAAGGAAGATGTCATTGGGATTCTCACTGCCGTCTCTGCTGAAAGAGTTTCCGTACGCGATGGGAAGACTACAAGAATGATCTTATTAGAGCTGCAAGATGATTTGGGTAAAATTCAATGTGCATTATTTGGAAAATATGTTGATGAAATGAATGAGTTTCTTGGCGCTGGAGGGAATGAACTACCAGTAATTATTTTGCAGTTTGCTAAGATAAAAACTTTCAATGGTAATCATAAACTAAATTATTTTTTGTTTATTTCCATTTCTATTTTTAATATAGTAGTTTTTATATTAAACCTTTCTTCTATTTCCACAGGGGATACTGTTGTTCAAAACGGACGTCGTTATGTTCCTATCCAGGAGGATTTTCTGGTGAATTATCCACGTAAAACAATTACCGAGTTGCACTTGAGTGAAGAGGAGGGATTTTTCATTGTCTTAGGTAGCATTGTTTCTGTGATAAATGATGATCAGTGGTGGTATAATGCTTGCAAATGTCACAGAGCAGTGACTAAAGATGGTGATAATTTCTATTGTCAGTCATGTCAGATTCGCGTGTCTGAAGTAACAATGAGGGTTGAAAAAGATGCAGAATATGTTTTCCGTTACGATGATTCATACAAAGTCAAACGAATATGTGATGACAAATCTAACAATAATGTAGTAACGCCAGAAAAGTTAAAAATTACTGTTAATCTTGATGAGTCTGAAAGTGTTCGCATTGACCAGCATGTTGTGAAAAAGAAAGATACTGTAGATGAGGGTTTTCTCTTGAATAATAATTTGGACCCTAATACTGTTACACACGTTGTATCTCTTGCTGATGATGAACCTAATGTCATTATTGATGAAGGAGGAACCTCTCAATTGGATTTTGGTGTTGGGATAGATTTAGCTAGTGGTAAAAATGATTTAAGTAAGGATGTCAGCGCTTTCTCTTGCAAGAAAAAACTGAAGTTCAAGAAAATCAAGATCGAGAAGATGTGA 1197 0.3551 MSDVFDKIERVNSDKQTWRLKVRVIRLWEMCPKLKPSEPYAIEMVFIDSDGNKIQATARKVVMHQFKNAIKEDVIGILTAVSAERVSVRDGKTTRMILLELQDDLGKIQCALFGKYVDEMNEFLGAGGNELPVIILQFAKIKTFNGNHKLNYFLFISISIFNIVVFILNLSSISTGDTVVQNGRRYVPIQEDFLVNYPRKTITELHLSEEEGFFIVLGSIVSVINDDQWWYNACKCHRAVTKDGDNFYCQSCQIRVSEVTMRVEKDAEYVFRYDDSYKVKRICDDKSNNNVVTPEKLKITVNLDESESVRIDQHVVKKKDTVDEGFLLNNNLDPNTVTHVVSLADDEPNVIIDEGGTSQLDFGVGIDLASGKNDLSKDVSAFSCKKKLKFKKIKIEKM 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01530 398 PANTHER OS03G0429900 PROTEIN 202 318 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pumo9g01530 398 SUPERFAMILY Nucleic acid-binding proteins 5 77 IPR012340 -
Pumo9g01530 398 CDD RPA1_DBD_B_like 73 170 - -
Pumo9g01530 398 SUPERFAMILY Nucleic acid-binding proteins 72 156 IPR012340 -
Pumo9g01530 398 Gene3D - 46 168 IPR012340 -
Pumo9g01530 398 Gene3D - 194 311 IPR012340 -
Pumo9g01530 398 SUPERFAMILY Nucleic acid-binding proteins 197 262 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01530 Pumo-Chr9 43356525 43359773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01530 73 262 Core DNA Replication Machinery Family AT5G08020 25.926 2.61e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01530 - - lja:Lj3g3v3527180.1 164.466