Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01514 ATGGTACCTCACCGTCTTCTTCGACACACAAGAGGCAAACAATCAATTGCTTACTCTGGCTGCCCTTCAGCTGCAGAATTTTCTTCAATATGGTCCTTTTTCTTAGACATCCCTTCTATGGGTGAAGCATGTGAGCAGGAACTAGGTTTGATGAGCATTAATGAGAACAGCAACAAGAGTGCTTGGGTTCCTCCAGAAGGGCAGAATGTGTCTGGTTCAGCTGAAGTGACTGATCTACCCAGCAAGGGTAAATCTTGGGTTGGCACATCTTCAATACCTGAGTCAAGCTCTGAACCTCGTATTCTGGACCAGCCACCTGGACCTGCCAATGAATGTATGCCCAAGTTGTACTGTCCTGGAAAGAAAGTTTCTGGAATATGTGAAGATGATGATCTATATGATGATTTCATTATGGATGAAGTGGATCTAGAACTTGAGAACTACGAGGAACTTTTTGGGATGGCTCTCAGTCACTCTGAAGAGCTTTTTGAAAATGGTGGAATTGATAGCTTATTTGAGACAAAGGACATGTCTGCTAGTGCTGGTGATTCCCAATGTCAGGGCGCTGTTGCTGCTGAGGGATCCTCTGCTGGGTTGGTCAATGCTATCCAACCAGCATGCAGCAATGCAGCATCTGCAGATTCAATGTTGAGTACAAAAACTGAACCAATTGTTTGTTTTACGGCAAGGCAATCTCAATCGAACATTTCTTTTTCTGGTGTTACCAAAGATAGTGCTGGTGACTATCAAGACTGTGGTGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCTTGGTGTCCTCCTTGCCCTGAGAGTTCTCTGCATTCTGCTAACCGCAGCAATGCTGTCATGCGCTATAAGGAAAAGAAGAAGACCCGGATGTTTGAGAAGAAAGTAAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAGGCGCGTGAAGGGCCGATTTGTGAAAGCCGGTGATGTCTATGACTATGACCCTTTGAACCAAACCAGAAGCTGCTGA 1011 0.457 MVPHRLLRHTRGKQSIAYSGCPSAAEFSSIWSFFLDIPSMGEACEQELGLMSINENSNKSAWVPPEGQNVSGSAEVTDLPSKGKSWVGTSSIPESSSEPRILDQPPGPANECMPKLYCPGKKVSGICEDDDLYDDFIMDEVDLELENYEELFGMALSHSEELFENGGIDSLFETKDMSASAGDSQCQGAVAAEGSSAGLVNAIQPACSNAASADSMLSTKTEPIVCFTARQSQSNISFSGVTKDSAGDYQDCGASSMLLMGEPPWCPPCPESSLHSANRSNAVMRYKEKKKTRMFEKKVRYASRKARADVRRRVKGRFVKAGDVYDYDPLNQTRSC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01514 336 MobiDBLite consensus disorder prediction 66 98 - -
Pumo9g01514 336 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 16 323 - -
Pumo9g01514 336 Pfam CCT motif 279 321 IPR010402 GO:0005515
Pumo9g01514 336 ProSiteProfiles CCT domain profile. 279 321 IPR010402 GO:0005515
Pumo9g01514 336 MobiDBLite consensus disorder prediction 66 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01514 Pumo-Chr9 43156638 43163810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01514 13 335 C2C2-CO-like Transcription Factor Family AT3G07650 49.848 2.05e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo9g01514 CCT 4.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01514 - - gmx:100783016 592.038