Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01503 ATGGATGAGCAGCGAAAGATCAGTGCTGTTGATTCTTCCTCTAACTCTGCTTCTATGGTGTCTTCTAAAAAATATGATGTTTTTCTAAGTTTTCGAGGTGAAGACACCCGTAGGAACTTCACAAGCCATCTATATAAAGCTTTGAATGAAGAGAAAGTCAAAACCTACATAGACAACCAGATTGAAAAGGGAGATGAAATCTCACCAACACTCATCAACGCCATCGAAGATTCTCGTATATCTATTGTCATCTTCTCAGAGAACTATGCTTCCTCAAAGTGGTGCTTGGGTGAACTCAGTAAGATTCTGGAATGCCAGAACGAAAAGGGACTGATTGTGATGCCCGTATTCTACAACATAGATCCATCCCATGTGAGGAGGCAGACTGGGAGGTACAAGCAAGCCTTTGCAAAACATGATGGAGAATCCAGGTGCAAAGAATGGAAAGCTGCTCTCACTGAAGCTGCCAATTTAGCGGGATGGGACTCTCGAACTTACAGATACCCAAACCAACATAAAGGACTGGTTGGAATTGAGGAAAATTTTAAACAAATTGAATCATTACTAAAAATTGGGTCATGTGAAGTTAGAACCCTTGGAATATGGGGAATGGGTGGCATTGGTAAGACCACTCTTGCTGCTTATTTATATGACAAATTGTCTCATAAGTTCGAAGGTTGTTGCTTCCTGACAAATGTAAGGGAAATATCTGTCAAGCCCCAAGATTTATGTGATAATTCTGAGATCAGTAGGCTTCGAGGTAAAAAAGTTTTGATTGTCTTGGATGATATGGCTACCTCAGAGCAATTAGAAAAACTAATGATATATTATGATTTTTGGGAACCGGGAAGTAGGGTCATTGTTACAACTAGGAATAAGCAAATACTAAGCCTAGTTGATGAAATATATCAGGTCCAAGATTTGAGCTCTCATCACTCTCTTCAGCTTTTGTGTAGGACTGTTTTTGGAGAAAGACAACCTAAAGATGGATATGAAGTTCTATTGAGAAGAGTAATTTCCTATTGCCAAGGTATTCCTCTAGCCATAAAAGTTCTTGGTGCAAGTCTCCGTAAAAGAAGTAAAGAGGCATGGGAAAGTGAATTGAGAAAACTCAAGGAGATTCCAAAAATGGAAATTCATGATGTATTAAAATTAAGTTATGATGGCTTAGACCCTTTTGAAAAGAACATATTTTTGGACATTGCATGCTTCTTCAAAGGAGAAAAAATAGATTGGGTAACACGCCTACTGGAAGCTTTTGGGTTCTATCCAGCTTCTGGAATTGAAGTCCTTTCAGATAGAGCTCTCATAACAATTTCATGTGACAATCGGATAGAAATGCATGACTTAATACAGGAAATGGGTCGGACAATTGTTGATCAAGAATCTAAAGACCCTGGAAGACGAAGTCGATTGTGGAGACCTAAGGATGTGCATGACGTATTGAAATATAATAGGGGAACTGATGTTGTTGAAGGCATCTTTCTAGATTTGCATACATTACCTGGGGATCTATATTTGAGCTCCGATTCCCTTGCAAAGATGACTTACTTAAGATTTCTTAAAATCCATACAGTGCTTTGGCAGAGTATTTACCTTCCTAATGGTCTCGAGTTATTATCTGATAATATGAGGTACCTTTATTGGGAAGGATTTTGTCTTGAGTCTTTGCCATCTAGCTTTTGTGCTGAACAGCTTGTGGAGCTTCACATGTCTTGTAGCAAACTTAAAAAGCTTTGGGACGGGGTTCAGAATCTTGTGAATTTAAAGAGAATTGAGCTTGACAACTCCAGAGACCTGATTGAGATCCCAGACTTATCAAAGGCAGAAAAACTTGAAAGAGTTTCTCTTTGTTATTGTGTAAGCTTGCGTCAGCTCCATCCATCCATGTTATCTCTCCCCGAGCTTACATATTTGTTTTTAAGAGACTGCACAGAGATTGAAAGCCTTAATGTTTATTCAAAATCTCTCAGTGAACTTGATCTCAATGGTTGTTCATCTCTCAAGGAAATCTCAGTGATATCAAAGGAAATAACAGAACTGGACTTATCTCACACCGCTATACATTCATTGTCATCATCGATGTTATCTCTCCCCAAGCTTACAAATTTGTATTTAAGTGGCTGCAGAGAGATTAAAAGCCTTAATGTTCAATCAAAGTATCTGCGTATACTAAGAGTCAATGGTTGTTCATCTCTGAAGGAATTCTCAATGACATCAGAGGAAATAACAGAATTGGACTTGTCTCACACTGCTATATGTTCTTTGTCATCAGCAATATCTCTCCCCAAGCTTACAAATTTGTGCTTAAGTGGCTGCAGAGAGATTGAAAGCCTTAATCTTCATTCAAAATCTGTCTGTCTACTTAGTCTCGAAGGTTGTTCATCTCTCAAGGAAATCTCAGTGACATCTGAGGAAATGACACATTTGGACTTATCTAACACCATTATATGTGGTTTGCCATCATCAATATTGTCTCTCCCCAAGCTTACACATTTGACTTTAAGTGGCTGCAGAGAGATTGAAAGCCTTAATGTTCATTTGAAATCTCTCCATAAACTTTGCCTCGATGGTTGTTCCTCTCTTAAGGAATTCTCACTCTCACTAACATCTGAGGAAATGACAGAATTAAACTTATCTTGCACTGCCATATGTGCATTGCCGTCATCAATTGGTCACTTATGGTCTTTAAAAGTGTTAGATCTAAGTGGAAGTAAAATGGGAGAATATTATGGTGTTCATTCTGCAGTGACTTTTGCCTTTGAAATCATCCTCTTAATTCATTATGGTGGATTGATTCATCATTTAGAAGTAAAAGTACATTCATATAGTTAA 2835 0.3813 MDEQRKISAVDSSSNSASMVSSKKYDVFLSFRGEDTRRNFTSHLYKALNEEKVKTYIDNQIEKGDEISPTLINAIEDSRISIVIFSENYASSKWCLGELSKILECQNEKGLIVMPVFYNIDPSHVRRQTGRYKQAFAKHDGESRCKEWKAALTEAANLAGWDSRTYRYPNQHKGLVGIEENFKQIESLLKIGSCEVRTLGIWGMGGIGKTTLAAYLYDKLSHKFEGCCFLTNVREISVKPQDLCDNSEISRLRGKKVLIVLDDMATSEQLEKLMIYYDFWEPGSRVIVTTRNKQILSLVDEIYQVQDLSSHHSLQLLCRTVFGERQPKDGYEVLLRRVISYCQGIPLAIKVLGASLRKRSKEAWESELRKLKEIPKMEIHDVLKLSYDGLDPFEKNIFLDIACFFKGEKIDWVTRLLEAFGFYPASGIEVLSDRALITISCDNRIEMHDLIQEMGRTIVDQESKDPGRRSRLWRPKDVHDVLKYNRGTDVVEGIFLDLHTLPGDLYLSSDSLAKMTYLRFLKIHTVLWQSIYLPNGLELLSDNMRYLYWEGFCLESLPSSFCAEQLVELHMSCSKLKKLWDGVQNLVNLKRIELDNSRDLIEIPDLSKAEKLERVSLCYCVSLRQLHPSMLSLPELTYLFLRDCTEIESLNVYSKSLSELDLNGCSSLKEISVISKEITELDLSHTAIHSLSSSMLSLPKLTNLYLSGCREIKSLNVQSKYLRILRVNGCSSLKEFSMTSEEITELDLSHTAICSLSSAISLPKLTNLCLSGCREIESLNLHSKSVCLLSLEGCSSLKEISVTSEEMTHLDLSNTIICGLPSSILSLPKLTHLTLSGCREIESLNVHLKSLHKLCLDGCSSLKEFSLSLTSEEMTELNLSCTAICALPSSIGHLWSLKVLDLSGSKMGEYYGVHSAVTFAFEIILLIHYGGLIHHLEVKVHSYS 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01503 944 Pfam Leucine Rich Repeat 565 584 IPR011713 -
Pumo9g01503 944 Pfam NB-ARC domain 251 373 IPR002182 GO:0043531
Pumo9g01503 944 Gene3D - 307 391 IPR042197 -
Pumo9g01503 944 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 717 IPR044974 GO:0006952
Pumo9g01503 944 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 189 - -
Pumo9g01503 944 SUPERFAMILY L domain-like 447 909 - -
Pumo9g01503 944 Gene3D - 2 155 IPR035897 -
Pumo9g01503 944 SMART till_3 24 158 IPR000157 GO:0007165
Pumo9g01503 944 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 161 IPR035897 -
Pumo9g01503 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 401 IPR027417 -
Pumo9g01503 944 PRINTS Disease resistance protein signature 198 213 - -
Pumo9g01503 944 PRINTS Disease resistance protein signature 652 668 - -
Pumo9g01503 944 PRINTS Disease resistance protein signature 342 356 - -
Pumo9g01503 944 Gene3D - 162 305 IPR027417 -
Pumo9g01503 944 Pfam TIR domain 24 159 IPR000157 GO:0007165
Pumo9g01503 944 ProSiteProfiles TIR domain profile. 23 186 IPR000157 GO:0007165
Pumo9g01503 944 Gene3D Ribonuclease Inhibitor 495 677 IPR032675 -
Pumo9g01503 944 Gene3D Ribonuclease Inhibitor 807 912 IPR032675 -
Pumo9g01503 944 Gene3D Ribonuclease Inhibitor 678 806 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01503 Pumo-Chr9 42873495 42878091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01503 764 900 WRKY Transcription Factor Family AT4G12020 36.364 1.28e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01503 - - ccaj:109806118 981.474