Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01495 ATGAAGTTCCAATTCCATGCTGTTCCATTTGTTCTGCTAAGCTTCATTGTGTCTCTCTTTGGCCTGATTGTAGCTGACTTGAACTCTGATAGACAAGCTCTCCTTGAGTTCTTTTCCAATGTTCCACATCACCCAAGGTTAAACTGGAGTGAGTCTACTCCAATTTGCACTTCTTGGGCTGGTGTGACTTGCAACCAAAATGAAACTAGTGTCATTGGAATCCATCTTCCAGGGGCTGGATTCAAGGGCTCCATTCCAGAGAACAGCCTAGGAAAACTAGATTCTCTTAAAATCCTGAGCCTTCACTCCAATGGCCTTAGAGGAAACCTTCCTTCTGACATTCTCTCCATTCCTTCACTCCAATATGTAAACCTGCAGAAAAATAACTTCTCAGGTCTAATCCCTTCAGCTATCTCCCCTAAACTCATAGTATTGGATATTTCCTCTAACAACTTTTCTGGCAGTATCCCACCTACCTTTCAGAATCTTAGTAGACTCACCTGGTTGTATCTCCAAAACAATTCCATCTCTGGGGCTATCCCTGACTTGAACCTTACAAGTCTCAAGTATTTGAATTTGAGCTATAACAACTTGAATGGCTCAATTCCAAATTCCATCAACAATTATCCATACACTTCTTTTGTTGGGAACTCTCACTTGTGTGGACCACCTCTCAATAATTGTTCTGAAGCCTCCATTCCATCTTCTTCTCCTTCCTCTCATTCTCATTCTCCTTCTCCTTCTCCTGTTTATCAACCACTCTCTCCAGCAGCATCTCCCCAAAGTAGAAGTGTTACCACTTCAAAGAGTTACTTTGGCCTAGCTACTATACTTGCTCTAGCAATTGGGGGCTGTGCCTTCCTCTCTCTCCTGGCTTTGGTCATCTTTGTATGCTGTTTGAAGAGAAATAAGAGTCAAGGCAGTGGCATACTGACAGGAAAGGCACCTTGTGCTGGAAAGGCTGAGATTTCAAAGAGTTTTGGGAGTGGGGTGCAAGAGGCTGAAAAGAACAAGTTGTTCTTCTTTGAAGGTTGCTCTTATAGCTTTGACCTTGAAGACTTGTTAAAGGCTTCAGCTGAAGTTCTTGGAAAGGGGAGCTATGGAACAACATATAGGGCCGCTTTGGAGGATGGAACAACAGTGGTAGTTAAAAGGTTGAGGGAAGTTCTAGTTGGAAAGAGAGAGTTTGAACAGCAGATGGAGATTGTAGGAAGAATTGGACGGCACCCCAATGTCATGCCCCTTCGAGCTTATTACTATTCCAAAGATGAGAAACTTATAGTCTATGACTACATGCCAGGAGGCAGCTTGTTTTTCTTGTTGCATGGAAACAGAGGCATGGGAAGAGCTCCATTAGACTGGGACTCTAGAATGAAGATTGCACTAGGAGCTGCAAAGGGAATTGCTTCCATTCACACTAATCACATGGACTCAAAACTCACTCATGGCAACATCAAGTCCTCCAATGTGCTCATAACCCAAGAACATGATGGCTGCATCACTGATGTAGGACTCACTCCTATGATGAGCACTCAATCAACCATGTCAAGAGCCAATGGCTACCGTGCTCCGGAAGTAACCGAGTACCGCAGGATCACTCAGAAGTCTGATGTTTACAGCTTTGGGGTGCTCCTTCTAGAACTGCTCACTGGCAAGGCCCCACTGGGATATCCTGGCTATGAGGACATGGTTGATCTTCCAAGGTGGGTGAGGTCTGTGGTTCGCGAGGAATGGACAGCTGAAGTCTTTGATGAGGAACTGCTTAGAGGGCACTATTTTGAAGAGGAGATGGTGCAGATGCTTCAGATTGCACTGGCCTGTGTGGCAAAGATGGCAGATAATAGGCCAACAATGGATGAAACTGTTAGGAACATAGAGGAAATTAGGCTTCCTGAATTGAAGAACCGTAACACATCATCCGAGTCTGATTCTAATGTACAAACTCCATGA 1950 0.4436 MKFQFHAVPFVLLSFIVSLFGLIVADLNSDRQALLEFFSNVPHHPRLNWSESTPICTSWAGVTCNQNETSVIGIHLPGAGFKGSIPENSLGKLDSLKILSLHSNGLRGNLPSDILSIPSLQYVNLQKNNFSGLIPSAISPKLIVLDISSNNFSGSIPPTFQNLSRLTWLYLQNNSISGAIPDLNLTSLKYLNLSYNNLNGSIPNSINNYPYTSFVGNSHLCGPPLNNCSEASIPSSSPSSHSHSPSPSPVYQPLSPAASPQSRSVTTSKSYFGLATILALAIGGCAFLSLLALVIFVCCLKRNKSQGSGILTGKAPCAGKAEISKSFGSGVQEAEKNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYRAALEDGTTVVVKRLREVLVGKREFEQQMEIVGRIGRHPNVMPLRAYYYSKDEKLIVYDYMPGGSLFFLLHGNRGMGRAPLDWDSRMKIALGAAKGIASIHTNHMDSKLTHGNIKSSNVLITQEHDGCITDVGLTPMMSTQSTMSRANGYRAPEVTEYRRITQKSDVYSFGVLLLELLTGKAPLGYPGYEDMVDLPRWVRSVVREEWTAEVFDEELLRGHYFEEEMVQMLQIALACVAKMADNRPTMDETVRNIEEIRLPELKNRNTSSESDSNVQTP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01495 649 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 432 639 - -
Pumo9g01495 649 SUPERFAMILY L domain-like 40 225 - -
Pumo9g01495 649 PANTHER OS05G0588300 PROTEIN 12 641 - -
Pumo9g01495 649 MobiDBLite consensus disorder prediction 232 262 - -
Pumo9g01495 649 FunFam pollen receptor-like kinase 1 324 431 - -
Pumo9g01495 649 ProSiteProfiles Protein kinase domain profile. 356 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01495 649 ProSitePatterns Protein kinases ATP-binding region signature. 362 393 IPR017441 GO:0005524
Pumo9g01495 649 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Pumo9g01495 649 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Pumo9g01495 649 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Pumo9g01495 649 MobiDBLite consensus disorder prediction 630 649 - -
Pumo9g01495 649 Gene3D Ribonuclease Inhibitor 141 230 IPR032675 -
Pumo9g01495 649 Pfam Leucine Rich Repeat 187 207 IPR001611 GO:0005515
Pumo9g01495 649 Pfam Protein kinase domain 360 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01495 649 Gene3D Phosphorylase Kinase; domain 1 322 431 - -
Pumo9g01495 649 MobiDBLite consensus disorder prediction 232 248 - -
Pumo9g01495 649 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Pumo9g01495 649 SUPERFAMILY Protein kinase-like (PK-like) 360 624 IPR011009 -
Pumo9g01495 649 Gene3D Transferase(Phosphotransferase) domain 1 432 647 - -
Pumo9g01495 649 FunFam Probable inactive receptor kinase RLK902 27 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01495 Pumo-Chr9 42634657 42638940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01495 5 647 Receptor kinase-like Gene Family AT5G58300 57.165 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo9g01495 Pkinase 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01495 - - gmx:100775340 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01495 9 42634657 42638940 Pumo10g01536 10 20310724 20315587 PCT