Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01493 ATGGTTTCCTCTGAGTTCTCTATCTTAAATGGAAATAGTTCACAGAAGCCTTTCCTGAACCAGTTGGTTCTACCAAATGGGCCACCTGATCGTTTGCCTTCTTCGAATTGTGAGGATTTTGAATTTTCTGATGTGTTTGGACCATCTCCTGTTGAAGCCTCTATAGCAGTAAGCTCTGAGAAACATGGAAATTCGGTAGCTACACGAGGTTCAAGTGAAAAGATTTACAATGATCCTGATTGTGTTCACGTCCGGTCTCAATCTTTATTGGCTCCCACAACCTGTATTGGTCAGTCCTTGAATCTTAGCAGGCTCACCTTACATGAGACAGATGATGCATTGGATCTTGTGGAGGAGGTCTTTATAGAAACACATGAAGAACTTAAGGAACATTCTGTTAACAATGCTGCAGTAGAGGAAAATAATTTACATTTCAATGATTACTGTCTGAATAATCAGACTATTGGAGTTGAGGATTTTGAAGTCTTGAAGGTTGTTGGGCAAGGTGCTTTTGGTAAGGTATATCAGGTGAGGAGGGCAGGCACTTCTGAAATATATGCTATGAAGGTCATGCGCAAGGATAAGATCATGCAGAGAAACCAAGCTGAATATGTAAAATCTGAAAGGGATATATTGACAAAGGTGGACAACCCATTTGTTGTGCGGCTCAGATACGCATTCCAAACCAAATACAGGTTGTACCTTGTGCTTGATTTTGTCAATGGTGGCCACCTTTTCTTTCAGCTCTATCACCAAGGCCTATTTAGGGAAGATTTGGCACGCTTCTATGCAGCAGAGGTTATTTGTGCTGTTTCTTATCTTCATGCAAATGATATAATGCACAGGGATCTTAAGCCTGAAAATATTCTTCTCGATGCAGATGGTCATGCAGTGTTAACAGATTTTGGCCTGGCTAAGCAGTTCAATGAGACTGAAAGGTCGAATTCTATGTGTGGAACTGTAGAGTACATGGCCCCTGAAATTGTTATGGGAAAAAGCCATGATAAGGCAGCTGATTGGTGGAGTGTGGGAATTTTACTATATGAAATGCTTACAGGAAAGCCTCCTTTCTATGGCGGAAATAGACATAAGATCCAGCAGAAGATAATTAAAGACAAAATCAAGCTCCCTGCCTTTTTGTCAAATGAGGCACATTCACTGTTGAAAGGGCTGTTGCAGAAAGATGTCAGCAAACGCCTTGGCAGTGGATCAAGAGGCAGTGAGGAGATTAAAAGCCACAAGTGGTTTAAATCAGTGAATTGGAAGAAACTGGAAGGCCGTGAAATTAGGCCAAGCTTTGTCCCAGATGTTGCTGGGAAGCAATGTGTTGCTAACTTCGAGGAGTGGTGGACTAGTATGCCCTTGCTGGATTCTCCAGCTGCTAGTCCCAAAAAGGATGACAATACATTCAACAAGTTCTCATATACTGCTACTCCGGTCATGATAGAAATGCATGGTTTCTACAGCAAAGGTCCAATTTGA 1482 0.4177 MVSSEFSILNGNSSQKPFLNQLVLPNGPPDRLPSSNCEDFEFSDVFGPSPVEASIAVSSEKHGNSVATRGSSEKIYNDPDCVHVRSQSLLAPTTCIGQSLNLSRLTLHETDDALDLVEEVFIETHEELKEHSVNNAAVEENNLHFNDYCLNNQTIGVEDFEVLKVVGQGAFGKVYQVRRAGTSEIYAMKVMRKDKIMQRNQAEYVKSERDILTKVDNPFVVRLRYAFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARFYAAEVICAVSYLHANDIMHRDLKPENILLDADGHAVLTDFGLAKQFNETERSNSMCGTVEYMAPEIVMGKSHDKAADWWSVGILLYEMLTGKPPFYGGNRHKIQQKIIKDKIKLPAFLSNEAHSLLKGLLQKDVSKRLGSGSRGSEEIKSHKWFKSVNWKKLEGREIRPSFVPDVAGKQCVANFEEWWTSMPLLDSPAASPKKDDNTFNKFSYTATPVMIEMHGFYSKGPI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01493 493 FunFam Non-specific serine/threonine protein kinase 157 261 - -
Pumo9g01493 493 Pfam Protein kinase domain 160 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01493 493 SMART pkinase_C_6 417 477 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo9g01493 493 SUPERFAMILY Protein kinase-like (PK-like) 145 460 IPR011009 -
Pumo9g01493 493 SMART serkin_6 160 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01493 493 CDD STKc_AGC 166 416 IPR045270 GO:0004674|GO:0005524
Pumo9g01493 493 Gene3D Phosphorylase Kinase; domain 1 158 458 - -
Pumo9g01493 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Pumo9g01493 493 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 485 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo9g01493 493 FunFam Non-specific serine/threonine protein kinase 240 435 - -
Pumo9g01493 493 ProSitePatterns Protein kinases ATP-binding region signature. 166 189 IPR017441 GO:0005524
Pumo9g01493 493 Gene3D Transferase(Phosphotransferase) domain 1 240 435 - -
Pumo9g01493 493 PANTHER RIBOSOMAL PROTEIN S6 KINASE 114 479 - -
Pumo9g01493 493 ProSiteProfiles Protein kinase domain profile. 160 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01493 Pumo-Chr9 42623498 42627491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01493 1 479 AGC Kinase Gene Family AT3G08720 61.746 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pumo9g01493 Pkinase 5.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01493 K04688 - gmx:100803509 861.677