Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01492 ATGGGTATATCAAGGACTTTCAAGTCAATGATCTGCAGAGTGGGGAGGATAATGATTGAACTACAAGGTAGGATTAATGATTGCAAAGCCCTTAAGTACCGAAAGGACCTTAACGCAAGGGATATTGAAACCTACAGATTGCAGGCTTTTGCAACACATCAGTGGGGTTGGGTTGTGATTACAACTACTGATGGAACTCTGGATCACGAAGAGCTCATGCATGAGGACTTGATGATTATGATGGATTGGATTTGA 255 0.4196 MGISRTFKSMICRVGRIMIELQGRINDCKALKYRKDLNARDIETYRLQAFATHQWGWVVITTTDGTLDHEELMHEDLMIMMDWI 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01492 84 PANTHER 40S RIBOSOMAL PROTEIN S15A 13 71 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo9g01492 84 Gene3D - 26 77 - -
Pumo9g01492 84 SUPERFAMILY Ribosomal protein S8 13 72 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01492 Pumo-Chr9 42618028 42618452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01492 13 77 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 58.462 2.49e-25 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01492 K02957 - gmx:100792186 102.834