Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01485 ATGGAAGCGCATCCAAACGCGGCCTCCATGCTGAGAACCAGGACCATAATACCTTCTCCACCATTGCTCGCCCTGAGTAAGAGGCTGCCGTCACCGTCACCGTTACCATTACCGTCACCCTCCGAACCCGTGAAACCCTCGTTCCACCGGTTTCCTCTCTTCTCGAATCCTCACACTCTTCAAACCATGACGCTTTCTAAGTGCTTCTCTCACTCCGTGCCAACCGTCCCCATTTCGGGCCCCAAACCCGAACCCGATTCCCCTGACACTCTCGTCGTGGTTTCCTTCTACAAGTTCGCGGATTTCCCCGACCACGCCCTCATGCGAAATCCCTTGAAGCAACTGTGCCAACGCCTGCGTGTTTCAGGTGGAATTATTCTTGCGCCTGAAGGGATCAATGGCAGCATATGTGGGACTCGGGAGTCAGTGGAGGAAGTTCTTGCATTTGTGGAGAGCGATGATCGATTGAAGGGGCTAAGGCGAGTGGAATCTCCTGTTAGTCCTGAGGAGGAGGCCATCCATCATGGGCATAGTGTCGCTTCTCCTCTTGCTGCAGGGGAAGATGCACCCTTCCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATCGTCACTCTTGGGATGCCTACCGTGTCGCCTATTGAAAGGGTTGGAAAGTATGTTGGCCCAGACGAGTGGAATGCTTTGATTAGTGATCCAGATACAGTGGTAATTGATGTGCGGAATAACTATGAAACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCTTGTACTACATCATTTCGTGAATTCCCATCTTGGGTGGATGAGCATTTCCAGCTTACCGAAACAGATGATAGTGAGCATCCAAAAGTTGAGGTAAACAATTCAGTCCAACCTGCTGAAAAAGAAATGGAGAATCAAAAACAACATATGCCGCGTGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAGAAAGCTACAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTTTCACCTGGAAGGTGGAATTCTAAAATATCTCGAGGAGGTTCCAGAGACAGAGAGCCTCTGGGAAGGGGAGTGCTTTGTTTTTGACAAACGAGTCTCTGTGGAGCATGGTTTGGTGCCAGGAAATTTCAAGCTCTGCTATGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAAGCCCCGGAATTCGAATATGGAGTCTCTTGTCCTCACTGTTTTGCACAGAAATCAGATGAAGAGAAGGAAAGGGCTCGAGCTCGACAAAGACAATTTAAGAGATGGGGGATCATAGGTGGTCCAGATAAGGGTCGCCGGCCAACTCGCGAACCGGAAAGTTCCAACAGGGAACCAAACCAGCTTTCACGTTCAATTTAA 1380 0.4906 MEAHPNAASMLRTRTIIPSPPLLALSKRLPSPSPLPLPSPSEPVKPSFHRFPLFSNPHTLQTMTLSKCFSHSVPTVPISGPKPEPDSPDTLVVVSFYKFADFPDHALMRNPLKQLCQRLRVSGGIILAPEGINGSICGTRESVEEVLAFVESDDRLKGLRRVESPVSPEEEAIHHGHSVASPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYVGPDEWNALISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVDEHFQLTETDDSEHPKVEVNNSVQPAEKEMENQKQHMPRVAMYCTGGIRCEKATSLLLSKGFKEVFHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMEAPEFEYGVSCPHCFAQKSDEEKERARARQRQFKRWGIIGGPDKGRRPTREPESSNREPNQLSRSI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01485 459 ProSiteProfiles Rhodanese domain profile. 232 354 IPR001763 -
Pumo9g01485 459 MobiDBLite consensus disorder prediction 433 447 - -
Pumo9g01485 459 Hamap tRNA uridine(34) hydroxylase [trhO]. 89 391 IPR020936 -
Pumo9g01485 459 SMART rhod_4 222 351 IPR001763 -
Pumo9g01485 459 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 87 424 IPR020936 -
Pumo9g01485 459 Pfam UPF0176 acylphosphatase like domain 92 204 IPR040503 -
Pumo9g01485 459 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 201 380 IPR036873 -
Pumo9g01485 459 Gene3D - 206 387 IPR036873 -
Pumo9g01485 459 Pfam Rhodanese-like domain 225 347 IPR001763 -
Pumo9g01485 459 CDD RHOD_YceA 219 347 - -
Pumo9g01485 459 MobiDBLite consensus disorder prediction 415 459 - -
Pumo9g01485 459 Gene3D - 82 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01485 Pumo-Chr9 42515677 42519434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01485 90 459 Sulfurtransferasese or Rhodanese AT2G40760 74.462 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01485 - - gmx:100784854 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01485 9 42515677 42519434 Pumo9g01485 9 42515677 42519434 ECH