Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01481 ATGAGGTGGCTCATCGGAATCTCCTGTTTTCCGGCGAAAATGGGTCGCCGGTGGCCGGTTCCGGTGAGAAGAGATCCCATAAGAGTGGGAGAGGTCGCTACAATAGAAGGAAGAGTGCAGTGTCATGGACAATACCCTCATGCACCACTGATGATAACATGGAGGAAGTATGGACAAAAGGAAGTCCTGAATTCTGAATTTCCTAGGAGTTACTTCAGGTGCGGTTACAAGTATGATCAAGGTTGCCGAGCAACCAAACAAGTGCAGAGCGATCAAGAGAATTCGGATATGTACCGAACTACTTACATTGGAATTCACACGTGCAATGCCACCTCTATGGCTACACATTCGGCCACAGATTCTACCACTTGGGAATCATATCTTCTGAATTCTGATCCTGACTCCAAGGTACCAAACTCACCAAGCTTAACTATAAAACAAGATTTTCCCAAAGAAAACACATCAAGTACTGATGTTACAGATCACAAGTTGAATCCTAGCATGTGGTCAGATTTGAAGAATTCTGAACCATTCAATAAGCCTACCATTGTGCCCTTAATAATGCAGATAATGTGTATTCATGCACAGACTCTCAACGTCTGGACATGGATTTTTGGGTGCCATCTGTTCATTTTGGCACTGATTTTCCTTTTGACGAAGCATATCAGGTTGGTTAGCCATGTTTCCAGGTTTCGTGCCAATTCACAAGCGGGCTTAACAGAATTCAATACTTCTTCCATGGTTTCTGCGAATTGA 756 0.4365 MRWLIGISCFPAKMGRRWPVPVRRDPIRVGEVATIEGRVQCHGQYPHAPLMITWRKYGQKEVLNSEFPRSYFRCGYKYDQGCRATKQVQSDQENSDMYRTTYIGIHTCNATSMATHSATDSTTWESYLLNSDPDSKVPNSPSLTIKQDFPKENTSSTDVTDHKLNPSMWSDLKNSEPFNKPTIVPLIMQIMCIHAQTLNVWTWIFGCHLFILALIFLLTKHIRLVSHVSRFRANSQAGLTEFNTSSMVSAN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01481 251 SUPERFAMILY WRKY DNA-binding domain 52 110 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01481 251 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 53 124 IPR044810 GO:0003700
Pumo9g01481 251 Pfam WRKY DNA -binding domain 53 109 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01481 251 ProSiteProfiles WRKY domain profile. 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo9g01481 251 MobiDBLite consensus disorder prediction 132 160 - -
Pumo9g01481 251 Gene3D WRKY domain 50 112 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo9g01481 251 SMART WRKY_cls 53 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01481 Pumo-Chr9 42482406 42487447 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01481 52 164 WRKY Transcription Factor Family AT3G56400 44.828 1.83e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo9g01481 WRKY 1.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01481 - - gmx:100796599 207.994