Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo9g01480 | ATGAAAAACATGGTTTGTCCTGAAAGTGAAAGTGTCTCAGCCAAGAAGAAGAGAGTGATAATCAAAGAACTTGTTAAGGGTCAGGAAGCTGCTACCCAACTCAAGGTTCTTCTTGAGAACCCCTCTGGGAGTGAAGGCTCTAATTTTTCTTCTGAGGAACTCATGGGCAATGTGCTGAGATCTTTCACACAAGCTCTTTCTATTATAAACTGTGGTTCTGCAGATGAGGTGGCTCGTCGGAATCTCCTGAATTCCGGCGAAAATGGGTCGCCGGTGGCCGGTTCCGGCAATGATCCAACTTCTGGAGATTGCAATGAGAAGAGATCCCAAAAGGGTGGGAGAGGTCGCTACAATAGAAGGAAGAGTGCAGTGTCATGGACCATACTCTCATGCACCACTCATGATAATCATGCATGGAGGAAGTATGGACAAAAGGGAATCCTGAATTCTGAATTTCCTAGGAGTTACTTCAGGTGCAGTCACAAGTATGATCAAGGTTGCCAAGCAACCAAACAGGTGCAGCTGGATCAGGAGAATCCGAATATGTACCAAACTACGTACATTGGACTTCACACATGCAATGCCACCCCTATGGCTGCACATTCAGCCATAGGTTCTAGTTCTACTGCATGGGAATCATATCTTCTGAATTTTGATGGTGACTCCAAGGTACCAAATGTACAAGATCACCACATTAGCTCACCAAGCCTAACTGTAAAACAAGAATTTCCCAAAGAAGACACACCAAGTGATGTTACAGGTCACAAGTTGGACACTAACTTGTGGTCAGATTTGAAGGACTTTCAACCATTCAAGCCTACCATTATGCCCTTAAAGATGGAATCTGATAATAATAATGCAGATAATGTGTATTCATGTACAGACTCTCAACATCTGGACATGGATTTTGAGGGTCCATCTGTTCATTTTGGCACTGACTTCCACTTTGACGAAAGTCACTTGCTTTAA | 969 | 0.4355 | MKNMVCPESESVSAKKKRVIIKELVKGQEAATQLKVLLENPSGSEGSNFSSEELMGNVLRSFTQALSIINCGSADEVARRNLLNSGENGSPVAGSGNDPTSGDCNEKRSQKGGRGRYNRRKSAVSWTILSCTTHDNHAWRKYGQKGILNSEFPRSYFRCSHKYDQGCQATKQVQLDQENPNMYQTTYIGLHTCNATPMAAHSAIGSSSTAWESYLLNFDGDSKVPNVQDHHISSPSLTVKQEFPKEDTPSDVTGHKLDTNLWSDLKDFQPFKPTIMPLKMESDNNNADNVYSCTDSQHLDMDFEGPSVHFGTDFHFDESHLL | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo9g01480 | 322 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 23 | 209 | IPR044810 | GO:0003700 | |
Pumo9g01480 | 322 | SMART | WRKY_cls | 133 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo9g01480 | 322 | MobiDBLite | consensus disorder prediction | 83 | 103 | - | - | |
Pumo9g01480 | 322 | MobiDBLite | consensus disorder prediction | 83 | 118 | - | - | |
Pumo9g01480 | 322 | Pfam | WRKY DNA -binding domain | 135 | 194 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo9g01480 | 322 | ProSiteProfiles | WRKY domain profile. | 135 | 196 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo9g01480 | 322 | Gene3D | WRKY domain | 117 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo9g01480 | 322 | SUPERFAMILY | WRKY DNA-binding domain | 130 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo9g01480 | Pumo-Chr9 | 42471585 | 42475689 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo9g01480 | 16 | 195 | WRKY Transcription Factor Family | AT3G56400 | 42.391 | 1.13e-38 | 137 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pumo9g01480 | WRKY | 1.5e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo9g01480 | - | - | gmx:100796071 | 479.174 |