Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01467 ATGGATTCCCGCGACTCCTCCCCTCGCTCCCGCGACCCCGACGCCGCCGACAACCACCACCACCACCACCCTCCTTCCTCCTTCGACGACCCCCCTCCCAAGGTGAAGCTCATGTGCAGCTTCGGCGGCCGCATCCAGCCCCGCCCCCACGACAACCACCTCACCTACGTCGCCGGCGACACCAAGATCCTCGCCGTCGACCGCCACGTCAAATTCTCATCCCTCATCGCCAAGCTCTCCTCCCTTGCCAACAACTCCTCCACCAACCTCTCCTTCTTCAAGTACCAGCTCCCCGGCGAAGACCTCGACGCCCTAATCTCCGTCACCAACGACGAAGACCTCCACCACATGATGCTCGAGTACGACCGCCTCTCCCGCTCTTCACCTAGACCCGCGCGCCTCCGCCTCTTCCTCTTCCCCCTCCACAACAACAACAATTTCGCTTCAACCGAATCGAAAACCGAGCGCCAGTGGTTCGTCGACGCTCTCAATTCAGTTCACGTTCCAGAAGGTTCGTCGCCGCCGCCGCCGCGACCTCCGGCAGCGAATCCGGATTTTCTGTTCGGGCTCGACAAGCCGCCGTCAATGGAGGATGCTCCGGCGAAGGATCCAGCGGCGGAATTGGAGTCTTTTCCCGAGGACCGTGAAGCGGTTAGAGAAACCGAACCTGAGATTCAGGAGCTGCGGAGAATGCAGATTGAGAACAACAATGAGCAACTTCTGCAACGGAAAATGAAGATAGAGGAAGATAATGATAATAACGGTAGGGTTTACGGTGTTAACGGCTGCGGGGACTGTTTCGCTCAGAAAAACGCGGAGAAAGTGACGCCGTTAGTGGCGCATGCGCATGCACACGCGCAAGCTGTTCATCCTGGTTCCGTTACTGGAACGGTGCCGTTTTTGCAGGACAGGAATAACGCGGGTTATTCGCTGGCGGTTCCTACTACGGGGAATGAGATTTATCTCATTCAGACGCCTTCTGGAATCTTCCAAGCGGTTCGGCCCGTGACTGGACCGGTTGGTCAACCGGTTTATCTGGTTCCCGCGCCCGGTTCGGTTTCGCATTCGGTTGGGTACAATGGTTCGGATGTTGCTGTGGCGGCGGAGCGTGGGTATTCGGCGGTGGGACGCGGTGGCGCGCGGTGGTGA 1149 0.5883 MDSRDSSPRSRDPDAADNHHHHHPPSSFDDPPPKVKLMCSFGGRIQPRPHDNHLTYVAGDTKILAVDRHVKFSSLIAKLSSLANNSSTNLSFFKYQLPGEDLDALISVTNDEDLHHMMLEYDRLSRSSPRPARLRLFLFPLHNNNNFASTESKTERQWFVDALNSVHVPEGSSPPPPRPPAANPDFLFGLDKPPSMEDAPAKDPAAELESFPEDREAVRETEPEIQELRRMQIENNNEQLLQRKMKIEEDNDNNGRVYGVNGCGDCFAQKNAEKVTPLVAHAHAHAQAVHPGSVTGTVPFLQDRNNAGYSLAVPTTGNEIYLIQTPSGIFQAVRPVTGPVGQPVYLVPAPGSVSHSVGYNGSDVAVAAERGYSAVGRGGARW 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01467 382 Pfam PB1 domain 51 140 IPR000270 GO:0005515
Pumo9g01467 382 Gene3D - 55 140 - -
Pumo9g01467 382 SMART PB1_new 49 141 IPR000270 GO:0005515
Pumo9g01467 382 MobiDBLite consensus disorder prediction 1 33 - -
Pumo9g01467 382 MobiDBLite consensus disorder prediction 196 222 - -
Pumo9g01467 382 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 54 141 - -
Pumo9g01467 382 Coils Coil 230 250 - -
Pumo9g01467 382 PANTHER OS05G0427100 PROTEIN-RELATED 2 280 - -
Pumo9g01467 382 MobiDBLite consensus disorder prediction 1 29 - -
Pumo9g01467 382 SUPERFAMILY CAD & PB1 domains 50 146 - -
Pumo9g01467 382 CDD PB1_UP2 38 139 - -
Pumo9g01467 382 MobiDBLite consensus disorder prediction 168 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01467 Pumo-Chr9 42190426 42191972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01467 29 166 MAP Kinase Kinase Kinase AT5G57610 41.549 1.37e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01467 - - gmx:100792391 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01467 9 42190426 42191972 Pumo9g01467 9 42190426 42191972 ECH