Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01465 ATGGTGTTGAGGAAAGTGGGCAAGTATGAGATTGGAAGGACCGTTGGAGAGGGAACGTTTGCGAAGGTAAAGTTCGCTCAGAACACAGAAACTGGCGAGAGTGTTGCCATGAAGGTGCTCGACCGTAGCACCATCATCAAGCACAAAATGGTCGACCAGATCAAGAGGGAAATTTCTATCATGAAGCTAGTCAGACATCCATATGTTGTTCGTCTACACGAGGCATCAAGCCGTACTAAGATTTATATCATATTGGAGTTTATTACAGGTGGTGAATTGTTTGATAAAATTGTAAGCCACGGGCGTCTTAGTGAAGCTGAATCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTTTTGCCACAGTAAGGGAGTTTATCATAGAGATTTAAAGCCTGAAAATCTTTTACTTGATTCACAAGGAAATATAAAGATTTCGGATTTTGGTTTGAGTGCATTTCCAGAACAGGGGGTCAGTTTGCTTCGGACAACTTGTGGGACTCCTAATTATGTAGCTCCTGAGGTACTCAGTCACAAGGGTTATAATGGTGCTCCAGCAGATGTTTGGTCCTGTGGAGTTATCCTCTACGTTCTATTGGCTGGATATCTTCCCTTTGACGAACTTGATCTAACTACATTGTACACACAGTTTTCGTGCCCTCCTTGGTTTCCTGTGGGAGCAAAGTCTTTAATACACAGAATGTTGGACCCAAATCCTGAACATCGTATAACCATTGAGCAGATAAGGAATGATGAGTGGTTTCAAAAGGGATATGTTCCAGTCAGTCTCATCGAGTATGAAGATGTAAATCTGGATGATGTAAATGCTGCATTTGACAATGATGAGGATCAGAGGACTAATCAGCAATGTGAGAATGACGACATGGGTCCTCTAACTCTTAATGCATTCGACATGATAATTTTATCTCAGGGCTTAAACCTTGCAAGCCTATTTGATCGTGGACAGGACTCTACGAAATACGAAACACGCTTCATCAGTCAAAAGCTACCACAGGTGATTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACGCATATTCGTAACTATAAGATGAGAATAGAGGGTATTTCAGCAAATAAGGCTTCTTATTTCTCAGTCTTTGAAATTGCTCCTACATTCTTCATGGTGGACATTCAGAAAGCAGCTGGAGATGCTGGTGAATATCTCAAGTTTTACAAGAATTTTTCTAGCAATCTTGAGGATATCATGTGGAAACCGCCCCACGAACCAAGCAAATTAAGGAACTCCAAGACTAAATGCAAAGGGCAGTAG 1311 0.4111 MVLRKVGKYEIGRTVGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEASSRTKIYIILEFITGGELFDKIVSHGRLSEAESRRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSAFPEQGVSLLRTTCGTPNYVAPEVLSHKGYNGAPADVWSCGVILYVLLAGYLPFDELDLTTLYTQFSCPPWFPVGAKSLIHRMLDPNPEHRITIEQIRNDEWFQKGYVPVSLIEYEDVNLDDVNAAFDNDEDQRTNQQCENDDMGPLTLNAFDMIILSQGLNLASLFDRGQDSTKYETRFISQKLPQVILSSMEVVAQSMGFKTHIRNYKMRIEGISANKASYFSVFEIAPTFFMVDIQKAAGDAGEYLKFYKNFSSNLEDIMWKPPHEPSKLRNSKTKCKGQ 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01465 436 SUPERFAMILY Protein kinase-like (PK-like) 6 270 IPR011009 -
Pumo9g01465 436 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Pumo9g01465 436 ProSiteProfiles Protein kinase domain profile. 9 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01465 436 FunFam Non-specific serine/threonine protein kinase 2 297 - -
Pumo9g01465 436 CDD CIPK_C 303 414 - -
Pumo9g01465 436 FunFam Non-specific serine/threonine protein kinase 1 87 - -
Pumo9g01465 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Pumo9g01465 436 Gene3D Kinase associated domain 1, KA1 296 418 - -
Pumo9g01465 436 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Pumo9g01465 436 Gene3D Phosphorylase Kinase; domain 1 2 87 - -
Pumo9g01465 436 Gene3D Transferase(Phosphotransferase) domain 1 88 264 - -
Pumo9g01465 436 Pfam Protein kinase domain 9 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01465 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 403 - -
Pumo9g01465 436 Pfam NAF domain 299 357 IPR004041 GO:0007165
Pumo9g01465 436 SMART serkin_6 9 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01465 436 FunFam Non-specific serine/threonine protein kinase 297 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01465 Pumo-Chr9 42169564 42175567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01465 1 380 CBL-interacting serine-threonine protein kinases AT4G24400 79.016 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo9g01465 Pkinase 6.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01465 - - gmx:100816735 820.076