Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01457 ATGGCCTCACAAGCAGTGCAGTTGCGTATCGAAGACAGTCAGGTGGTTATGGACAATGGCATACTGCAAGTATATTTATCAAATCCAGGTGGATTTGTTACTGGAGTACAATATAATGGCATTGATAATCTTCTTGAAACTCTTAACGAAAATTATAATAGAGGGTATTGGGACGTTGTGTGGAGTGAAGCCGGAAGTACAGGAACAACTGGAACATTTGAACGGATTGTGGGAACAAGTTTTAATGTTATAACGGAAAATGAGGAACAGGTTGAAATCTCATTCACAAGTAAGTGGGATCCGTCTCTGAAGGGAAAGAGGGCACCTCTTAATATCGACAAAAGGTATGTGATGCTTCGTAATTCCTCAGGCTTTTACTCCTATGCCGTCTTTGAACACCTAGAGGAGTGGACCTGCTTTCAACATACCTCAAATAAGGATTGTTTATAA 450 0.4044 MASQAVQLRIEDSQVVMDNGILQVYLSNPGGFVTGVQYNGIDNLLETLNENYNRGYWDVVWSEAGSTGTTGTFERIVGTSFNVITENEEQVEISFTSKWDPSLKGKRAPLNIDKRYVMLRNSSGFYSYAVFEHLEEWTCFQHTSNKDCL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01457 149 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 141 - -
Pumo9g01457 149 Pfam Rhamnogalacturonate lyase family 3 141 IPR010325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01457 Pumo-Chr9 42008308 42009177 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01457 1 141 Polysaccharide Lyase AT1G09910 59.574 2.53e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01457 K18195 - gmx:100815677 270.011