Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01443 ATGCCTCACAGGGCGACTTACTTTTTCCCGAGGCAGTTCCCGGAAAGAGGGTTGGATGAATCTTCAAAGCAGAGATTAGATCACGAGAAGAAGAAAATCGTCAACTCCATCAAATCATCGGATACGACTTTTGCCTATGAAAGCGACGCGCCGAAAAAGCAGACACAGACTCCTCCCACACCTGCCGCCAAAGACGACATCGTTTTCTCGTCCACTAAGCAAAACGCCGTCTCCGATTTATTCACCGGCGCCGACAAGTTCCGAACCAAGCAGAAGCAAATCGCCGCCTTCTGCGACTGGTTGATCGATAAAAAGAAGGATCGGAGCCGACAGAGTCACCATTTCAAGCCCTATCCGAACGACGAGGAAGATGAAGACGAACGCGAGCTTCTGATTCCGCCGCAGCCGCCTGCGGCGGCGGCGGCGGCCGAGGTGGTGAAGGATGCCGTCGACCGGAGCTTCGACGGGCAGGTTTCGCTGCCGCGGTTGTCCAGCGGGAGCAGCTACTCCGGAAGCTTGTTCACGCTCGACGGAACCGCCACATTTTCCAGCGACGTTACGAAAGACGAAACGTCGTCGTTTCATCAAGTCTTCGCCGAAGAAGACGCAACAAAAAAACAGCAAGAAGAAAAAGAAAAGGAAGAAAAACGCAATACAGCGCAGAAGTATAAAGAAAGCTACTGCCTGCAACTCGCGTTTACGAAGAGGCTGTCTTGCTTAGCAAGCCTTGGCTCCGAACCTGTGCTCACTCTCGACGCTGGCACCGACACCTGGGACGCTGAGTCCGTTTCGTATCGTCTGTGGGTGAGTGGGTGTTTGTCGTATACGGATAAGATATCTGACGGTTTTTACAACATATTGGGGATGAATCCGTACCTGTGGGTGATGTGCAACGATGTGGAGGAAGAAGGGAAGCGGTTACCGACTCTGATGGCGCTTAAGGCGGTTGAGCCTAGCGAGACTTCAATAGAGGTTGTTCTTTTCGATAGACACGAGGATTCTCGGCTTAAGGAGCTTCAAGATAAAGCTCAGGAGTTGTATTGTGCGTCGGAGAACGCGTCGGTGCTGGTGGAGAAGCTCGGAAAACTCGTTGCCATATGCATGGGGGGTACGTTTCCGGTGGAGCAAGGAGATCTACACAAGCGGTGGAAGTTGGTGAGTAAGAGGTTGAGGAATTTTCACCAATGTGTTGTGCTTCCTGTTGGTAGCTTGTCTAGTGGACTCTGTAGGCATCGTGCGATTCTCTTCAAGAGATTGGCGGATTACATTGGTTTGCCATGTCGCATTGCTCGAGGTTGTAGGTACTGTGTTTCAGATCATAGATCGTCTTGCCTAGTCAAGATTAAAGATGACAGACTGCTCTCAAGGGAATATGTAGTTGATCTGGTTGGGGAACCAGGAAATATCCATGGGCCAGATTCCTCTATTAATGGAGCATATGTGTCTTCAATACCTTCCCCATTTCAAATTTCTCATTTGAAAGAATCCCAATCGCCATATGTGGATGTTGCAGCATGTTCTCAATCTCTAGGCCGTGTACAGGAAGATCAACAAGCTGAAGAAACTGATCTGCAGAAAAATAATAATGGCTCTATTTATCCTGCAATAGATCAAACTCGTGGAGGTGTTTCTGAAGATCTTCACCCAGCCACTGAAGCATCATTACATGAATACCCCAGGCTCACTAAAGATTCAGTTGTAGTACTAGAAGCTTCCAAGAAAGAGATAGAGATCATTGTAAAAGGAAGTTCTGGGGTTAGAAGTACCTATAAGCAATCTACACTGAGTTCATCCAGCGAATCAGAACAGGAACAAGTAAAAAATAAAGTTGAAAATCAGGGTGCTGGTAATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGATTGGCTTGAGATACCATGGGAGGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGGACAGTTTATCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAATTGAAAGAGTTTCTGAGAGAGGTTGCAATAATGAAACGAGTACGTCATCCAAATGTGGTGCTGTTCATGGGTGCAGTTACTAAACGTCCCCATCTATCTATAGTAACAGAATATTTGCCTAGGGGCAGTTTATTTCGCCTAATACATAAGCCAGCATCTGGTGAGATTCTAGATCCAAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGTCTAAAGCCTCCAATTGTGCACTGGGATCTTAAAACCCCAAACCTGTTAGTGGACAGAAATTGGACTGTAAAGGTCTGTGATTTTGGATTGTCCAGATTTAAGGCGAACACTTTCTTATCATCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGAGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGGGTTATCCTGTGGGAACTTGTGACTCTGCAACAACCATGGAATGGACTTAGTCATGCCCAGGTGGTTGGAGCTGTCGCTTTTCAGAATAGGAGGCTTGCTATCCCTCAAAACATCTCCTCAGCGTTGGCCTCCCTCATGGAATCTTGTTGGGCCGACAACCCTGCTGATCGGCCATCTTTTGGTAGCATAGTTGAGTCGCTAAAGAAGCTACTGAAGTCACCAGCGGATGCAATAAAAATGGGTGGGCAATAA 2733 0.4694 MPHRATYFFPRQFPERGLDESSKQRLDHEKKKIVNSIKSSDTTFAYESDAPKKQTQTPPTPAAKDDIVFSSTKQNAVSDLFTGADKFRTKQKQIAAFCDWLIDKKKDRSRQSHHFKPYPNDEEDEDERELLIPPQPPAAAAAAEVVKDAVDRSFDGQVSLPRLSSGSSYSGSLFTLDGTATFSSDVTKDETSSFHQVFAEEDATKKQQEEKEKEEKRNTAQKYKESYCLQLAFTKRLSCLASLGSEPVLTLDAGTDTWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEEGKRLPTLMALKAVEPSETSIEVVLFDRHEDSRLKELQDKAQELYCASENASVLVEKLGKLVAICMGGTFPVEQGDLHKRWKLVSKRLRNFHQCVVLPVGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCVSDHRSSCLVKIKDDRLLSREYVVDLVGEPGNIHGPDSSINGAYVSSIPSPFQISHLKESQSPYVDVAACSQSLGRVQEDQQAEETDLQKNNNGSIYPAIDQTRGGVSEDLHPATEASLHEYPRLTKDSVVVLEASKKEIEIIVKGSSGVRSTYKQSTLSSSSESEQEQVKNKVENQGAGNIPRYLNLEPSLAMDWLEIPWEDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRLAIPQNISSALASLMESCWADNPADRPSFGSIVESLKKLLKSPADAIKMGGQ 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01443 910 SMART serkin_6 640 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01443 910 FunFam Serine/threonine-protein kinase isoform 1 630 718 - -
Pumo9g01443 910 MobiDBLite consensus disorder prediction 16 36 - -
Pumo9g01443 910 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 194 899 - -
Pumo9g01443 910 Coils Coil 199 226 - -
Pumo9g01443 910 Gene3D Phosphorylase Kinase; domain 1 633 717 - -
Pumo9g01443 910 PRINTS Tyrosine kinase catalytic domain signature 821 843 IPR001245 GO:0004672|GO:0006468
Pumo9g01443 910 PRINTS Tyrosine kinase catalytic domain signature 755 773 IPR001245 GO:0004672|GO:0006468
Pumo9g01443 910 PRINTS Tyrosine kinase catalytic domain signature 714 727 IPR001245 GO:0004672|GO:0006468
Pumo9g01443 910 PRINTS Tyrosine kinase catalytic domain signature 865 887 IPR001245 GO:0004672|GO:0006468
Pumo9g01443 910 FunFam Serine/threonine-protein kinase CTR1 719 904 - -
Pumo9g01443 910 Pfam Ethylene-responsive protein kinase Le-CTR1 260 469 - -
Pumo9g01443 910 MobiDBLite consensus disorder prediction 197 219 - -
Pumo9g01443 910 Pfam Protein tyrosine and serine/threonine kinase 640 894 IPR001245 GO:0004672|GO:0006468
Pumo9g01443 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Pumo9g01443 910 MobiDBLite consensus disorder prediction 514 544 - -
Pumo9g01443 910 ProSiteProfiles Protein kinase domain profile. 640 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01443 910 CDD STKc_MAP3K-like 646 894 - -
Pumo9g01443 910 ProSitePatterns Protein kinases ATP-binding region signature. 646 667 IPR017441 GO:0005524
Pumo9g01443 910 Gene3D Transferase(Phosphotransferase) domain 1 719 906 - -
Pumo9g01443 910 MobiDBLite consensus disorder prediction 109 128 - -
Pumo9g01443 910 MobiDBLite consensus disorder prediction 37 65 - -
Pumo9g01443 910 MobiDBLite consensus disorder prediction 1 65 - -
Pumo9g01443 910 SUPERFAMILY Protein kinase-like (PK-like) 619 893 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01443 Pumo-Chr9 41838398 41845137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01443 1 909 MAP Kinase Kinase Kinase AT4G24480 57.247 0.0 1028
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pumo9g01443 PK_Tyr_Ser-Thr 7.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01443 - - gmx:100786546 1618.59