Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01439 ATGAGCGAACAAGAGAACAAGGGTTGTGCTTTTTTGGGAACCAACTCCTCTTATTCAGGTTTTCTTCTTGACCCTGCAAAATGTGGTATGCTGAGTTTGCCGGACAAACAAAGACTAGTCCATGAGATTGCTCGACAGCCAAAAGATGCGTCAAGTATGCTTCAGTCATTTACACGAAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACCAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCCAACTTGCACATCAATGGAAATACACCTGCTCAATCTCCTGCCAAAAGTTGCATTGGATCTAAAAGGAAAAAGAAACCTGCATCTCAGGATTTACATCATGCTCCTCTAGGGAACAGTAAAGAGGAAACGGTGAAAACCTTTTTGTGTCAAAATGTTGCGTGCAAAGCTACATTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGTATATGTCATCATTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCTGATCTTCCCAATGAGGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGGGTAGTTGTGATATTAAGTTGGACGGAACCTTCTGTTGTGTTTCTTGTGGAAAAATTAATGAACTAATGAAGACGTGGCGAAAACAATTATTGGTTGCCAAAGAAGCAAGAAGAACAGATATACTCTCTTTGCGAATATCCCTGGCCCACAGAATTCTTCTAGGAACAGAAGTTTTCAAGGAAGTGCAGAAAATTGTGGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGATCACTTGATCATGTATATGCTAGTATGACACGTGGAATTGTGAGCAGGCTTTCATGTGGTGCTGAGGTTCAGAGATTGTGTTCTACTGCACTTGAATGTTTTGATTCAAAGTTTTCTGACCTTTTCTCTATTTGTGTGGAAAAGAAAGATGCACCAACATGTTCAATTCGTTTTGAAGAGTGTCTTCCTACTTCAGTGGTTATTGTCCTAGATTACAAAGACAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACCGAATATCAACAATGGACTACCCTGAACAACCCACCTTCATTGTCTTGAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTGCATCCTTCAACTGAATACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAAGCTAAATGGGTGACACCTTGTGAACCCACCAATCCTTCAAAAGTTATCAGTCGCGGTGGGAATCGCTTTAGATGGTCCCCTCAAAGATCCTCAGGTACAAGAGTGGACATGTGTGCACAGGACCAAGTAACTGCTGAAATTCATCCCACAGAATCTGCCAACTCTGACATGAAGTTATCATCTGGAGAACAACATCCTGGGAAGAAACACATCATTTTGAACATCAGGAGCAGGTTTGAAGAGTTCCTCTCCAAGCCTCAACCACTAGAGCCTTTTTCATACAAAAATCTTGCTGCAGTTTCACCTTCCACACCATCTAAATCCTATGAAATGAGGCAAATTCCTGGTTTGAATTCTAGAAAGCGCTCGAAGGAGAACGATTACGAGTATTCTGTCAGGGTAGTCAAATGGTTAGAGCATCAAGGGCACATAGATGAAATCTTCAGAGTAAGATTTCTCACTTGGTTCAGCCTCAAGGCTACTCAGCAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGATGACCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGTGACGAGATATGTTGCGAGCAAAAATCTTAG 1887 0.4128 MSEQENKGCAFLGTNSSYSGFLLDPAKCGMLSLPDKQRLVHEIARQPKDASSMLQSFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLHINGNTPAQSPAKSCIGSKRKKKPASQDLHHAPLGNSKEETVKTFLCQNVACKATLNPEDSFCKRCSCCICHHYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALSNQMSGILKGSCDIKLDGTFCCVSCGKINELMKTWRKQLLVAKEARRTDILSLRISLAHRILLGTEVFKEVQKIVETALKLLENEVGSLDHVYASMTRGIVSRLSCGAEVQRLCSTALECFDSKFSDLFSICVEKKDAPTCSIRFEECLPTSVVIVLDYKDKLLKNFLGCRLWHRISTMDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTPCEPTNPSKVISRGGNRFRWSPQRSSGTRVDMCAQDQVTAEIHPTESANSDMKLSSGEQHPGKKHIILNIRSRFEEFLSKPQPLEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKRSKENDYEYSVRVVKWLEHQGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01439 628 MobiDBLite consensus disorder prediction 100 132 - -
Pumo9g01439 628 CDD PHD_VIN3_plant 165 229 - -
Pumo9g01439 628 Pfam PHD - plant homeodomain finger protein 145 264 IPR032881 -
Pumo9g01439 628 PANTHER VIN3-LIKE PROTEIN 2-RELATED 21 458 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01439 Pumo-Chr9 41820528 41825587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01439 23 622 PHD Gene Family AT5G57380 34.314 1.37e-102 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01439 - - gmx:100785502 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01439 9 41820528 41825587 Pumo9g01439 9 41820528 41825587 ECH