Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01436 ATGAAAAAGCAAAAGCAGAGTAAGGTTCCTTTCCGTGAGGATGATGCTGCTGTTCTATTGCAAAGGTACGATGCACAAACGGTTTTGACGTTGCTTCAGGAATTGGCGAATTATCCGCATTCGAAGTTCGACTGGAATGATTTGGTAGCCAAAACCTCAACAGGAATTTCTAATGCCAGAGAGTATCAGATGCTGTGGCGTCATTTGGCCTATGGTCACTCCTTTGTTGAAATTTTGGATCGCGATACCCAACCTCTGGATGATGATAGTGACTTAGAATGTGAACGAGAAGCATTGCCCCGCCCAAACAAGGAAACTGCAGCAGAAGCTTCAGCATGTATGCAGGTAATGATTGCATCTTTTAAGCTGAGTGAATCCACTCCTACTAGCTCGGTGATTCAGGCTCCACTGACAATAAATGTTCCAGCATGTGATTCATCTAGAATTGCTATTAAGGATAGTTCACAGCCCTCTAGTTCGGGGACACAAGGAACAAACATTACTTTTCCAGTTACGGTTAAGAGACAGGCACTGCCAAATGTATCGTCAACAAGAGATGTGGAAGCCAGTGGATCAGTTAGTGGCAACACATCCATTAAAAAGAAAAGAGAACCATGGTCAGAAGAAGAGGACTTGCAACTACGAGCTGCTATTCAGAGGTGGGGTGAAGGTAATTGGGCACATATGGCTAAAAGAGAAGACTTTCCTATTAAGAGAAGTAGCTCACAGTTGTCTAAGAGGTGGAGCACATTACGAAAGAAAGAGGGCGACACCAATTGA 780 0.4385 MKKQKQSKVPFREDDAAVLLQRYDAQTVLTLLQELANYPHSKFDWNDLVAKTSTGISNAREYQMLWRHLAYGHSFVEILDRDTQPLDDDSDLECEREALPRPNKETAAEASACMQVMIASFKLSESTPTSSVIQAPLTINVPACDSSRIAIKDSSQPSSSGTQGTNITFPVTVKRQALPNVSSTRDVEASGSVSGNTSIKKKREPWSEEEDLQLRAAIQRWGEGNWAHMAKREDFPIKRSSSQLSKRWSTLRKKEGDTN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01436 259 MobiDBLite consensus disorder prediction 180 200 - -
Pumo9g01436 259 Pfam Myb-like DNA-binding domain 203 251 IPR001005 -
Pumo9g01436 259 SMART sant 202 254 IPR001005 -
Pumo9g01436 259 MobiDBLite consensus disorder prediction 180 210 - -
Pumo9g01436 259 CDD SANT_TRF 205 253 - -
Pumo9g01436 259 MobiDBLite consensus disorder prediction 237 259 - -
Pumo9g01436 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 256 IPR017930 -
Pumo9g01436 259 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 259 - -
Pumo9g01436 259 SUPERFAMILY Homeodomain-like 200 252 IPR009057 -
Pumo9g01436 259 Gene3D - 196 257 - -
Pumo9g01436 259 ProSiteProfiles Myb-like domain profile. 198 252 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01436 Pumo-Chr9 41765307 41770382 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo9g01436 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01436 - - gmx:100819057 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01436 9 41765307 41770382 Pumo9g01436 9 41765307 41770382 ECH
Pumo9g01436 9 41765307 41770382 Pumo10g01072 10 13835397 13843259 PCT