Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01429 ATGCACAGCGCAACGCGTGCCGAAGCGGAGCGTCTCCTCGGGATCGCGGAGAAGCTCCTCCATAACCGCGATCTGTTGGGCTCTCGCGAGTTCGCGATCCTCGCCCAGGAGACGGAGCCCCTCCTGGAGGGCTCCGACCAGATCCTCGCCATCGTCGACGTCCTCCTCGCCGCCGACAAGCGCGTCAACAACCACCCCGACTGGTACGCCGTCCTCCAGGTCGATCGCCGCTCCGACGACCTCGACCTCATCAAGAAGCAGTACCGCCGCCTCGCCCTCCTCCTCCACCCCGACAAGTCCCGCTTCCACTTCGCCGACCACGCCTTCAAGCTCGTCGCCGATGCGTGGGCCCTACTCTCCGACCCTGTTAAGAAATCGGTTTATGATAAGGAGCTCTCTTTCTTCTCCCGCGTGGATTTGTCCGTCCCTGGATGGGTCCAGCAGGACAAGCTCCCGGTCCGCAGGACTGGGCCCGGGCCCAGCTCCCGCAACAGCGCTGCGGCCCGGGAGGACATTCACGCGGACGAGAATTCCAGGAGGAGGAACTCCACCTTCTGGACCGCTTGTCCTTACTGTTACCGTTTGTACGAATACCCTAGGGTTTATGAAGGTTGTTGTTTAAGATGCCAGAATTGCGAGCGAAGCTTTCACGGCGTCGCGGTTCCCTCGCTGCCGCCGCTCGTGCCGGGCCAGGAGGCTTACTATTGCTGCTGGGGGTTCTTCCCCATGGGGTTTGTTGCTGGCAGCTTCGGTTCACCGGAGAAAGAGGCGGTGCCGGTGCAACCAGCACCGCCGCCTCCGCCTCAACCGGCTTCCTCGCTGCCTAATTGGATGCCGGTCCCGCGGAGAATGGCGCGGGAAGTGCACATGCGACACCGGTGGCAGCGGCGAGGGTGA 897 0.6332 MHSATRAEAERLLGIAEKLLHNRDLLGSREFAILAQETEPLLEGSDQILAIVDVLLAADKRVNNHPDWYAVLQVDRRSDDLDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWALLSDPVKKSVYDKELSFFSRVDLSVPGWVQQDKLPVRRTGPGPSSRNSAAAREDIHADENSRRRNSTFWTACPYCYRLYEYPRVYEGCCLRCQNCERSFHGVAVPSLPPLVPGQEAYYCCWGFFPMGFVAGSFGSPEKEAVPVQPAPPPPPQPASSLPNWMPVPRRMAREVHMRHRWQRRG 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01429 298 SMART dnaj_3 66 124 IPR001623 -
Pumo9g01429 298 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Pumo9g01429 298 Pfam DnaJ domain 67 129 IPR001623 -
Pumo9g01429 298 PRINTS DnaJ domain signature 104 124 IPR001623 -
Pumo9g01429 298 PRINTS DnaJ domain signature 88 103 IPR001623 -
Pumo9g01429 298 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pumo9g01429 298 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Pumo9g01429 298 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 279 - -
Pumo9g01429 298 Gene3D DnaJ domain 56 139 IPR036869 -
Pumo9g01429 298 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Pumo9g01429 298 MobiDBLite consensus disorder prediction 151 175 - -
Pumo9g01429 298 MobiDBLite consensus disorder prediction 254 277 - -
Pumo9g01429 298 CDD DnaJ 67 121 IPR001623 -
Pumo9g01429 298 MobiDBLite consensus disorder prediction 258 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01429 Pumo-Chr9 41680488 41682784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01429 2 279 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 53.521 1.79e-100 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01429 - - gmx:100816918 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01429 9 41680488 41682784 Pumo9g01429 9 41680488 41682784 ECH
Pumo9g01429 9 41680488 41682784 Pumo10g01060 10 13734445 13736946 PCT