Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01413 ATGGGAGAAGATTGCGGAACCTGGATTCCGGAGCTGCATTTTGATTGGCAATCTCCCAATTTGAGCTCCTTCGATGCTGCTGCACCCGTAGGCACGGGGAAGCAAAATGGTACTTCTGCAGCTATGAATCCGGTTGCCAACGTGGTCACAAGAAACGCGACAATGCCAGCTTATGGGTCCTCTGCACTACCTCATTCGCAGTTAGGGCATTCTGGTGAACCTCATGGTTGGTTTTATTGTTTGCCTCGCTTTCGACAGGGATTTACTACGCCTGCTCGAAACTTCAATGCAGAGGAAAAACTCCCTGCTGGCCACGTGAAAGGTTTTAGGGAGGAAGTTGCGCTGAATGGGGAACTGGGTTTCCCTCAGAAGCAATTCCTGGTTATTGATCAAACCGGTGATCAAACAACTCTTGTTTATAGTTCAAGGTTTGGGGGTCCTGTCGAGTGCCTTGCTTCCTGGGATTCAAAGCTTCATCATGGTTCTAACCATTTGAACAACGGGAATGAATTGCGTTCTTTGAGGAGAGATATGAATCATGTGGTTGGACTTGGACCAACTTTGGATGATAAAGTTGGTGAAAATCAAGGAACTGATGATGATGACATTGAAAGTGAGATGCATGAGGACACAGAAGAAATTAATGCATTGCTTTACTCTGACAGTGATGGTTATTCCACTGAGGATGATGATGATGAAGTTACTAGCACAGGACATTCACCCAGTACAATGACCACTCACGATAACCAGGAAGAACCCGATAGGGGAACCGCCGAAGAAGTTGCTAGCTCCGTCGGAGAAATAAAGAAGCGAAAGCTATGGGACGGGGCTTATGATGACAATGACATGCAGTTCATGGACACTGCTAGTTCTCTGAATGGGAAAAGACCCTTTGAAGTTGGAGATGATGCCGAATCAAGATGCTCTAGTGGTGGCAACAGTAGTAGAGGGTCAGGTGAAATGGGTTCCATGTCAGGCAATAAAAAGATGAGAAAGGAAAAGATTCAAGATGTTCTGAGCATTCTGCAATGCATAGTTCCTGGTGGAAAGGACAAGGACCCAATTGAGCTTCTTGATGAAGCCATTCGTTGCTTGAAATCATTGAAACTCAAGGCCATAGAACTTGGACTTGAATCACTTGATGCTATATAA 1152 0.454 MGEDCGTWIPELHFDWQSPNLSSFDAAAPVGTGKQNGTSAAMNPVANVVTRNATMPAYGSSALPHSQLGHSGEPHGWFYCLPRFRQGFTTPARNFNAEEKLPAGHVKGFREEVALNGELGFPQKQFLVIDQTGDQTTLVYSSRFGGPVECLASWDSKLHHGSNHLNNGNELRSLRRDMNHVVGLGPTLDDKVGENQGTDDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDEVTSTGHSPSTMTTHDNQEEPDRGTAEEVASSVGEIKKRKLWDGAYDDNDMQFMDTASSLNGKRPFEVGDDAESRCSSGGNSSRGSGEMGSMSGNKKMRKEKIQDVLSILQCIVPGGKDKDPIELLDEAIRCLKSLKLKAIELGLESLDAI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01413 383 PANTHER TRANSCRIPTION FACTOR BHLH145 8 378 IPR037546 -
Pumo9g01413 383 MobiDBLite consensus disorder prediction 299 326 - -
Pumo9g01413 383 MobiDBLite consensus disorder prediction 195 209 - -
Pumo9g01413 383 MobiDBLite consensus disorder prediction 182 265 - -
Pumo9g01413 383 MobiDBLite consensus disorder prediction 307 322 - -
Pumo9g01413 383 MobiDBLite consensus disorder prediction 248 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01413 Pumo-Chr9 41356076 41357227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01413 29 369 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 32.286 2.69e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01413 - - gmx:100803342 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01413 9 41356076 41357227 Pumo9g01413 9 41356076 41357227 ECH
Pumo9g01413 9 41356076 41357227 Pumo10g01048 10 13605743 13609326 PCT