Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01411 ATGCGCTACCTCACTTGCAACGCCGAGTCCGCAATAGCCACATGCGACCCTCACTCCCTCAAGACCAAGAAAAAAAACAAAAAAAAGCCCAAAAGCCCAACCCAGGCCCATACCGTGCGACACTTCGCCTACTCCGACATCCTCGCCGCCACCAACAACTTCTCCGCCGACAACTTCCTAGGAAAAGGCAGCCACGGCAGCGTCTACAAGGCCACCCTCGACGGCGCAGCCCTCGTCGCCGCCGTCAAAAAAACCAAACCCTCCAACGAAATCGAAATCCTCTCCCACCTCAAAAACCCGCGCTTGGTCAACCTAATTGGCTTCTGCAACGACCTAACCAACAACATTAACAACAACAACAACAACAAACTCATTGTTGTCGAGTACATGCCCAACGGCTCGCTCCACGAGCTTCTCCACTCGACCAAAAAAAAAACGGTCCGACCCCCCGGCTGGACCGCGCGCGTCCGGTTCGCGGTTCAGGTCGCGAAAGCGGTTCGCGGCTTACACTCTTCCGAACCGCCCGTGATTCACAGAGACATCAAATCGTCCAATGTGTTAATCGATGAAAACTGGAACGCGCGGCTAGGCGACTTCGGACTCGCCGTTAGGGGACACGTGGCGGATTCTCGCGTGCCTCCGGCGGGGACGTTAGGGTACCTCGACCCGTGCTATCTTGCGCCGGGGGACTTGAGTTTCAAGAGCGACGTTTTCAGCTTCGGCGTTTTGCTCTTCGAGATCGCGAGTGGGAGGCACGCGATCGACGTGCGGCACAGTCCGCCGTCGGTGCTGGACTGGGCGGTGCCGCTGGTGCGGCGCGGCGAGTTTAGGGAGATTTGCGACCCGCGGATCGGGGCGCCGCCGGACATGGCAGCGTTCCGGCGGATGGCGTTGCTGGCGGCGAGGTGCGTGCGGTCCTCCGCGGAGAAGCGGCCGTCGATGGCGGAGGTGGTGGAGTGTCTCGCGGCGGTGAGGAAATGTTTTCGCGCGCCGGTGATGTGGAAGAGATTGAAGAAGCGCGTGGTGGAGGCGCGTGGGGATTCGTTCCTTGACTGGGATAGGAGTGAGGAAGTTGTGAGAGTAGTTAAGGTTGGAAGTAGAAGGAATGGGAAAGTATCTAGTGTGTCGGGTGTAGAGTATGAGAGTGGACCCACGAATCATGCGGTGAGATCTAGATCGGTTGGTTCTGGTTCGGGTGGGTATCCGAACCAAATTGGTTTTGGGTTCGGAAATGGGAAAGGGAGAGTGAGGCTAAAGAGATCGAGGTCAATGGGGTTTTTGAGACATAACGGTAATAATAATGATACCGTTATTTCGACAGAGATGGCGCTGTCCAAGTTGGGTATTAAGGAAAAGAAGTTGGAACAGAGAATGCTGGAAAAACCGTTGGTTTATTATTCGCATGGCGTTGAGAATCAAAGTAATTGA 1428 0.5574 MRYLTCNAESAIATCDPHSLKTKKKNKKKPKSPTQAHTVRHFAYSDILAATNNFSADNFLGKGSHGSVYKATLDGAALVAAVKKTKPSNEIEILSHLKNPRLVNLIGFCNDLTNNINNNNNNKLIVVEYMPNGSLHELLHSTKKKTVRPPGWTARVRFAVQVAKAVRGLHSSEPPVIHRDIKSSNVLIDENWNARLGDFGLAVRGHVADSRVPPAGTLGYLDPCYLAPGDLSFKSDVFSFGVLLFEIASGRHAIDVRHSPPSVLDWAVPLVRRGEFREICDPRIGAPPDMAAFRRMALLAARCVRSSAEKRPSMAEVVECLAAVRKCFRAPVMWKRLKKRVVEARGDSFLDWDRSEEVVRVVKVGSRRNGKVSSVSGVEYESGPTNHAVRSRSVGSGSGGYPNQIGFGFGNGKGRVRLKRSRSMGFLRHNGNNNDTVISTEMALSKLGIKEKKLEQRMLEKPLVYYSHGVENQSN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01411 475 ProSiteProfiles Protein kinase domain profile. 54 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01411 475 Gene3D Transferase(Phosphotransferase) domain 1 130 336 - -
Pumo9g01411 475 MobiDBLite consensus disorder prediction 375 397 - -
Pumo9g01411 475 PANTHER OS01G0253100 PROTEIN 23 326 - -
Pumo9g01411 475 SMART serkin_6 54 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01411 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Pumo9g01411 475 Pfam Protein kinase domain 57 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01411 475 SUPERFAMILY Protein kinase-like (PK-like) 28 321 IPR011009 -
Pumo9g01411 475 Gene3D Phosphorylase Kinase; domain 1 15 129 - -
Pumo9g01411 475 ProSitePatterns Protein kinases ATP-binding region signature. 60 84 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01411 Pumo-Chr9 41315895 41317910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01411 40 321 Receptor kinase-like Gene Family AT3G59420 42.424 1.01e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo9g01411 Pkinase 3.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01411 - - gmx:100811580 667.151