Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01403 ATGAAAAAGAAACGAAAGGAAAGCGAGGCCAGTGAACGATCGAACTTGCCGGAGATTTCGAAGTCGCATTACTCGCTGGAGCGATGTTCGCGGCTGAACAAACGGTGCAGGGAAGACGGCGTGGCGACGGTCCCGCCCTGCGGCGCGTCGTTACTTTTAACGCCGTCACGGGGACTGAAGCGGAAGATAGGGTGCATTGACAAGGCCACGCAGATGGGACGAAGCGAGAGGATCGAGGAGGATTACGTGACCGGTGGGAGCGCGATCGGGCAGGGGAAGTTCGGGTCGGTGACGCTGTGCCGCGCACGTGCGGGGGGAGGGGAGTACGCGTGCAAGACGCTGAGGAAGGGGGAGGAGACGGTGCACCGGGAGGTGGAGATAATGCAGCACGTGTCGGGGCACCCTGGGGTGGTGACGCTGAAGGCGGTGTATGAGGATGCGGAGTGTTGGCATCTTGTGATGGAGTTGTGTGCTGGGGGGAGGTTGGTTGATAGGATGAGGGAGGGTCCGTGCTCGGAGCACGTGGCGGCGGGGGTACTGAAGGAGGTGATGTTGGTGGTTAAGTATTGTCATGATATGGGCGTGGTGCATAGGGATATTAAGCCTGAGAATGTTTTGCTCACTGCGGCGGGGAGGATCAAGCTCGCGGATTTCGGGCTCGCCATCAGGATTTCCGAGGGTCAGAATTTGACAGGTGTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATATTCTGAGAAGGTGGATATATGGAGTTCTGGGGTGCTTCTGCATGCTTTGTTGGTTGGTGGTCTTCCATTTAAAGGAGATTCACCGGAAGCAGTTTTTGAGGAAATTAAGAATGTCAAACTAGATTTCCAAACAGGGGTGTGGGAATCAATATCTAAACCTGCGCGAGATCTTGTTGGGAGAATGCTGACAAGGGATGTTTCAGCAAGGATAACAGCTGATGAAGTACTAAGGCATCCATGGATATTGTTCTACACGGAGCGTACATTAAAGATGCTTCCTGTTAAATCAAAATTGAAACTCCAAAATGCAGCTGCTTGCCACAAGTTTGTTTCTGCACCTGAATCTGTGTTAGGAGGAAACAGGGTAGATGATGGCTCCCTTGATGAGGATTATTCAAGCCCATTTTCATCCTCTGAAAGTTGCAATTCAGAATATCACGATGACTGTGTGTGGATTGATGCACTTGCCACTGCAGTTTCACGTGTGAGTATATCCGAAACAAAGAGGACCAAGTTGTGGAGTCCCACTGGTCCAATTGATCAGCAAGGTTCATCAAACATGAAGACTAACCTCTGTAAAGCATTCTGA 1335 0.5169 MKKKRKESEASERSNLPEISKSHYSLERCSRLNKRCREDGVATVPPCGASLLLTPSRGLKRKIGCIDKATQMGRSERIEEDYVTGGSAIGQGKFGSVTLCRARAGGGEYACKTLRKGEETVHREVEIMQHVSGHPGVVTLKAVYEDAECWHLVMELCAGGRLVDRMREGPCSEHVAAGVLKEVMLVVKYCHDMGVVHRDIKPENVLLTAAGRIKLADFGLAIRISEGQNLTGVAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLVGGLPFKGDSPEAVFEEIKNVKLDFQTGVWESISKPARDLVGRMLTRDVSARITADEVLRHPWILFYTERTLKMLPVKSKLKLQNAAACHKFVSAPESVLGGNRVDDGSLDEDYSSPFSSSESCNSEYHDDCVWIDALATAVSRVSISETKRTKLWSPTGPIDQQGSSNMKTNLCKAF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01403 444 Pfam Protein kinase domain 87 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01403 444 Gene3D Phosphorylase Kinase; domain 1 86 162 - -
Pumo9g01403 444 ProSiteProfiles Protein kinase domain profile. 83 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01403 444 PANTHER SERINE/THREONINE-PROTEIN KINASE 68 354 - -
Pumo9g01403 444 FunFam Maternal embryonic leucine zipper kinase 79 356 - -
Pumo9g01403 444 SMART serkin_6 83 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01403 444 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Pumo9g01403 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Pumo9g01403 444 SUPERFAMILY Protein kinase-like (PK-like) 85 364 IPR011009 -
Pumo9g01403 444 Gene3D Transferase(Phosphotransferase) domain 1 163 361 - -
Pumo9g01403 444 CDD STKc_CAMK 86 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01403 Pumo-Chr9 41145731 41148947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01403 67 330 EF-hand Containing Proteins AT4G04720 44.000 1.04e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo9g01403 Pkinase 4.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01403 - - gmx:100809977 756.903