Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01376 ATGGAGCGCTATGAGATCCTCAAAGATATTGGTTCAGGAAATTTTGCTGTGGCCAAGCTTGTTAGGGACAACTGCACCAATGAGCTTTTTGCTGTCAAGTTTATTGAGAGGGGCCAGAAGATTGATGAGCATGTCCAGAGGGAAATCATGAACCATAGATCATTGAAGCACCCCAATATTATTAGATTCAAAGAGGTCCTGCTGACATCAACACATCTAGCCATAGTAATGGAGTATGCTTCTGGAGGAGAGCTCTTTGAGAGGATATGCAATGCTGGTAGATTCAGTGAGGATGAGGCAAGATTTTTCTTTCAGCAATTGATATCAGGAGTCAGTTACTGTCATTCAATGCAAATCTGTCATAGAGATCTGAAGCTTGAGAACACACTCTTAGATGGAAGCACAGCACCGCGAGTCAAAATTTGTGACTTTGGTTACTCAAAGTCATCAGTATTGCATTCACAACCTAAGTCAACGGTAGGAACTCCAGCTTACATTGCACCAGAGGTTCTTACAAGGAAAGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATATGTGATGTTAGTTGGGGCTTATCCTTTTGAAGACCCTGCAGATCCAAGAAACTTCAAAAAAACCATTGGTAAGATACTTAGTGTCCAGTACTCAGTCCCCGATTATGTACGAGTTTCCACGGAATGTAGACATCTTCTATCACAAATATTTGTGGCAAGTCCTGAAAAGAGAATAACAATACCAGAAATTAAAAACCATCAATGGTTTTTAAGGAACTTGCCCATAGAACTGATGGAAAGTGGAAGCTGGCAAATAAATGATGTAAATAATCCATCACAAAGTGTTGAGGAAGTCCTGTCTATTATCCAAGAGGCAAGAAAATCTCTTAATGTTCCCAAGCTTGGTGGCCTTCTCACTGGGTGCAGCATGGACCTGGATGACTTGGATGCTGATGAAGATCTTGAAGATCTAGAAACAAGTGATGAATTTGTGTGCCCTATTTAA 1017 0.4071 MERYEILKDIGSGNFAVAKLVRDNCTNELFAVKFIERGQKIDEHVQREIMNHRSLKHPNIIRFKEVLLTSTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPADPRNFKKTIGKILSVQYSVPDYVRVSTECRHLLSQIFVASPEKRITIPEIKNHQWFLRNLPIELMESGSWQINDVNNPSQSVEEVLSIIQEARKSLNVPKLGGLLTGCSMDLDDLDADEDLEDLETSDEFVCPI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01376 338 FunFam Serine/threonine-protein kinase SAPK2 1 79 - -
Pumo9g01376 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pumo9g01376 338 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01376 338 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01376 338 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pumo9g01376 338 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01376 338 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pumo9g01376 338 CDD STKc_SnRK2 3 259 - -
Pumo9g01376 338 PANTHER SERINE/THREONINE KINASE 2 280 - -
Pumo9g01376 338 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Pumo9g01376 338 SUPERFAMILY Protein kinase-like (PK-like) 2 278 IPR011009 -
Pumo9g01376 338 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01376 Pumo-Chr9 40723392 40727453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01376 3 279 CBL-interacting serine-threonine protein kinases AT4G24400 41.259 2.90e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pumo9g01376 Pkinase 3.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01376 K14498 - gmx:100798091 638.262