Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01361 ATGGCTGATTCACTATCAGTTAATGTTGATTCTTCACCTAAGTCTGAATTCTCTACTGAAGAAGCACACAAACCTACCCATGAATCTCAACACTCTCCATCTAACATCCAAAAGGCTATTGCTGAGGTCGTTGGCACATACATTCTTATATTTGCAGGATGTGGAGCAGCTCTTGTAAACGAGAAGTTGCCACTTACAATAGTAGGCATAGCAATTGTTTCGGGTCTAGCTCTCACGGTGGCTACATATTCTGTTGGCCATGTCTCTGGTGGCCATTTCAATCCTGCAGTTACAATTGCTTTGGCTGCTGTCAGAAAAGTTCAATTGAAACTTGTGCCTATTTATGTGTTGTGCCAGATGATGGGTGCTACACTGGCCCCTCTCACCCTCAAAGTGTTGTATCATGACAAAGTGGATATTGGAGTAACAGTGACTAAATACTTGAGCTCAACTTCTGATCTAGAAGCAATAGTGTGGGAATTCATCACCACTTCCATACTGATGCTCACCATTTGCGGTGTTGCCACTGATCACAGAGGGGTACCCAAAGATCTCACTGGAGTTGCGATAGGCATTTCAGTTCTGATTAACATTGTTATAGCCGGGCCTATTACTGGAGCTTCAATGAATCCAGCAAGGAGTTTAGGCCCAGCTATTGTATCTGGTGATTACAAAAATATTTGGGTTTATATTGTAAGCCCAATTCTTGGAGCAGTCTCAGCAAGTGCACTTTACAAATTCCTGGAAGTAACCAAACCAGTTAAACCTGAACCATGTCATTGTAACATATGCAAGTATAATCATTTACCTTTATAA 816 0.4167 MADSLSVNVDSSPKSEFSTEEAHKPTHESQHSPSNIQKAIAEVVGTYILIFAGCGAALVNEKLPLTIVGIAIVSGLALTVATYSVGHVSGGHFNPAVTIALAAVRKVQLKLVPIYVLCQMMGATLAPLTLKVLYHDKVDIGVTVTKYLSSTSDLEAIVWEFITTSILMLTICGVATDHRGVPKDLTGVAIGISVLINIVIAGPITGASMNPARSLGPAIVSGDYKNIWVYIVSPILGAVSASALYKFLEVTKPVKPEPCHCNICKYNHLPL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01361 271 Gene3D Glycerol uptake facilitator protein. 3 257 IPR023271 -
Pumo9g01361 271 MobiDBLite consensus disorder prediction 1 15 - -
Pumo9g01361 271 Pfam Major intrinsic protein 32 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g01361 271 PANTHER AQUAPORIN NIP2-1 19 252 IPR034294 -
Pumo9g01361 271 SUPERFAMILY Aquaporin-like 29 252 IPR023271 -
Pumo9g01361 271 MobiDBLite consensus disorder prediction 1 34 - -
Pumo9g01361 271 ProSitePatterns MIP family signature. 92 100 IPR022357 -
Pumo9g01361 271 CDD MIP 37 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g01361 271 NCBIfam MIP family channel protein 41 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g01361 271 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g01361 271 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g01361 271 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g01361 271 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g01361 271 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo9g01361 271 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01361 Pumo-Chr9 40406567 40408483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01361 37 255 Major Intrinsic Protein MIP AT5G37820 46.875 1.84e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01361 K09874 - gmx:100798380 492.656