Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01331 ATGGCAGCTACGATGAATTTCTACAACGGAACATCACAACTTCAGTCAGATCCATTCAGAGGTGAGCTCATGGAAGTTCTAGAACCTTTTATGAAAAGTCCTTCCTCAACTCCCTCTACTATCTCTTCAGATTCACCCTTACCTTCTACTTCATATTCTTACTCTCCTTCTCCTTCACCTTCACCTTCACCTTTTAACTTTCCCTCCTCTTCTTCACTCCCTCCACTCCCAAATTTCAACACAGACACTCCCTCCTACCTATTCCAAAGCCAACAATCCTTGATAGGCTTTGAGCAGCCAAGCTCCCTTCTCGGGCTCAACCACCTAAGCCCGTCTCAGATTTCCCAGATCCAGGCCCAAAGCCAAAACACTCTGAGCTTCTTGGGCCCGAAGCCTGTCCCAATGAAACAAGCTGGCGGGCCTCTGAAGCCCACGAAGCTGTACCGCGGCGTGAGGCAGAGGCATTGGGGGAAATGGGTCGCGGAGATCAGACTCCCGAAGAACCGAACCAGGCTCTGGCTCGGAACCTTCGACACTGCCGAGGAGGCAGCATTGGCGTACGACAAGGCTGCTTACAGGCTCCGAGGCGACTTCGCGAGGCTCAACTTCCCGAACCTGAAAGGCTCGTGCCTCGGCGAGTTCAAGCCTATGCAGTCGGCGGTTGACGCCAAGCTCGACGCTATCTGCCAGAGCCTGGCCGAAATGCAGAAGCAAGGGAAGACCGAGAAAGGTGCCAGGTCATCCAAGAAGTCCAAGCAAGGTCCCAAGGAGACACTCAACCCGAACCAGGATCCAAGCCTACTAGAGGGAAACCTGAACCTTTCTTGCAAACCTGAGCCTGAAGCTTCGGCTGCTGCTCTGTCTCCAGAAAGTGATGGTTCTGCGGATTCTTCTCCGCTGTCTGATCTTACCTTTGATGTCACCGAGCCGCAATTGGAGGATGCTTCCGCACATTTTAATCTGCAGAAGTTTCCTTCTTATGAGATCGATTGGGATTCTCTCTGA 1005 0.5234 MAATMNFYNGTSQLQSDPFRGELMEVLEPFMKSPSSTPSTISSDSPLPSTSYSYSPSPSPSPSPFNFPSSSSLPPLPNFNTDTPSYLFQSQQSLIGFEQPSSLLGLNHLSPSQISQIQAQSQNTLSFLGPKPVPMKQAGGPLKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDFARLNFPNLKGSCLGEFKPMQSAVDAKLDAICQSLAEMQKQGKTEKGARSSKKSKQGPKETLNPNQDPSLLEGNLNLSCKPEPEASAAALSPESDGSADSSPLSDLTFDVTEPQLEDASAHFNLQKFPSYEIDWDSL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01331 334 SMART rav1_2 147 210 IPR001471 GO:0003700|GO:0006355
Pumo9g01331 334 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 334 - -
Pumo9g01331 334 MobiDBLite consensus disorder prediction 254 270 - -
Pumo9g01331 334 Gene3D AP2/ERF domain 147 205 IPR036955 GO:0003700|GO:0006355
Pumo9g01331 334 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
Pumo9g01331 334 MobiDBLite consensus disorder prediction 53 71 - -
Pumo9g01331 334 PRINTS Ethylene responsive element binding protein signature 170 186 IPR001471 GO:0003700|GO:0006355
Pumo9g01331 334 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Pumo9g01331 334 MobiDBLite consensus disorder prediction 1 78 - -
Pumo9g01331 334 ProSiteProfiles AP2/ERF domain profile. 147 204 IPR001471 GO:0003700|GO:0006355
Pumo9g01331 334 MobiDBLite consensus disorder prediction 32 52 - -
Pumo9g01331 334 MobiDBLite consensus disorder prediction 290 305 - -
Pumo9g01331 334 FunFam Ethylene-responsive transcription factor 2 146 205 - -
Pumo9g01331 334 MobiDBLite consensus disorder prediction 236 309 - -
Pumo9g01331 334 MobiDBLite consensus disorder prediction 1 18 - -
Pumo9g01331 334 MobiDBLite consensus disorder prediction 239 253 - -
Pumo9g01331 334 Pfam AP2 domain 148 196 IPR001471 GO:0003700|GO:0006355
Pumo9g01331 334 CDD AP2 146 206 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01331 Pumo-Chr9 38952745 38954569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01331 1 334 AP2-EREBP Transcription Factor Family AT1G78080 47.425 8.75e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo9g01331 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01331 K09286 - gmx:100802961 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01331 9 38952745 38954569 Pumo10g01156 10 14933646 14935639 PCT