Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01318 ATGTCCTCAATGGGTGATCCAGCTGATGAAAATCTTGAAACGAAAAAGATGGATGCAAGAAGTTTGTCATCTTCACATGGCCAGGAACCATATGTCCACAAGGTTGGAATTCCTCCAAGACAAAACCTTTTCAAGGAATTCCAATCCACTGTAAAAGAAACATTTTTCGCGGATGATCCTCTACGATCCTTCAAGGATCAAACTAAGTCTCGGAAGCTCATCCTTGGAATTGAAGCCATTTTCCCCATAATTAGCTGGGGGAGAACTTATAATCTCACAAAATTTAGAGGGGATCTTATTGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTAGATCCACAGTATGGATTGTACTCCAGCTTTATTCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGACATTGCAATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTCAGAGCGAGATTGATCCCGTTGCAAATCCAGTAGACTATCGTCGACTTGCTTTTACTGCCACTTTCTTTGCTGGGATTACTCAAGCAACACTTGGGGTTTTAAGGTTAGGATTTTTGATTGATTTCCTATCTCATGCTGCAATTGTCGGTTTTATGGGGGGAGCTGCCATCACAATTGCCCTTCAACAGCTCAAGGGCTTCCTTGGGATTGAAAAGTTCACAAAGAAAACTGATGTTATCTCTGTGATGCATTCAGTGCTGTCATCAGCTCATCATGGATGGAATTGGCAAACTATAGTAATTGGAGCTGCCTTTCTGGCTTTTCTTCTGTTTGCTAAGTATATTGGAAAGAAGAACCCGAAATTCTTCTGGGTGCCAGCAATTGCCCCGTTGATATCTGTTATTCTCTCTACCCTTTTTGTATACTTAACCCGTGCAGACAAGCATGGTGTTGCAATTGTAAAACATATAGAGAAAGGGATCAATCCTTCATCTGTCAAGGAAATTTTTTTTACTGGTGATTACCTTGGGAAAGGTTTCAGAATTGGCATCGTGGCTGGCATGATAGCATTGACTGAAGCCACAGCAATTGGAAGAACATTTGCTTCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGTTATGTAGCAACCGGTTCTTTCTCTCGGTCGGCAGTAAATTTCATGGCTGGCTGTGAAACCGCAGTATCTAACATTATCATGTCTGTTGTTGTGTTCTTAACCTTGCAATTCCTCACACCTCTTTTCAAATACACTCCAAATGCCATTCTTTCTACAATCATCATTTCTGCTGTCATCAACCTTGTGGATTATAAGGCGGCAATTTTGATATGGAAGATTGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTTGGGGTTGTTTTTGCCTCGGTTGAGATAGGACTTTTAATTGCAGTCTCTATATCCTTTGCAAAGATCCTATTACAAGTCACAAGGCCACGAACTGCAATTCTGGGGAAGATCCCTAGGACTACTGTCTACAGAAACATCCAACAATACCCTGAAGCCACAAGGGTTCCTGGTGTACTGATTATTAGAGTTGATTCTGCAATATATTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTAAGATGGCTGATGGATGAGGAAGAACTAGTGAAAGGAGACTACCAAACAAGAATCCAATTTTTGATAGTAGAGATGTCACCCGTTACCGACATCGATACCAGCGGCATCCATGCCCTTGAAGAGTTATTTAGAAGTCTTCAGAAGAGAGATGTTCAGCTTGTTCTGGCAAACCCTGGCCCAATAGTAATAGACAAGCTCCACACATCAAACTTTGCTGCTTTGCTTGGAGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTGTTGCATACTGTTCTCCAAAGCTGGCTGAAGACCCTTGA 1977 0.4158 MSSMGDPADENLETKKMDARSLSSSHGQEPYVHKVGIPPRQNLFKEFQSTVKETFFADDPLRSFKDQTKSRKLILGIEAIFPIISWGRTYNLTKFRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFIPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQSEIDPVANPVDYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIEKFTKKTDVISVMHSVLSSAHHGWNWQTIVIGAAFLAFLLFAKYIGKKNPKFFWVPAIAPLISVILSTLFVYLTRADKHGVAIVKHIEKGINPSSVKEIFFTGDYLGKGFRIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCETAVSNIIMSVVVFLTLQFLTPLFKYTPNAILSTIIISAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATRVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEELVKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELFRSLQKRDVQLVLANPGPIVIDKLHTSNFAALLGEDKIFLTVAEAVAYCSPKLAEDP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01318 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020
Pumo9g01318 658 MobiDBLite consensus disorder prediction 1 31 - -
Pumo9g01318 658 Gene3D STAS domain 507 654 IPR036513 -
Pumo9g01318 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Pumo9g01318 658 Pfam STAS domain 528 646 IPR002645 -
Pumo9g01318 658 NCBIfam sulfate permease 82 646 IPR001902 GO:0016020|GO:0055085
Pumo9g01318 658 PANTHER SULFATE TRANSPORTER 41 651 IPR001902 GO:0016020|GO:0055085
Pumo9g01318 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Pumo9g01318 658 FunFam Sulfate transporter 31 507 653 - -
Pumo9g01318 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Pumo9g01318 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01318 Pumo-Chr9 38769645 38773850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01318 1 657 Inorganic Solute Cotransporters AT1G22150 77.473 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01318 K17470 - gmx:100797668 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01318 9 38769645 38773850 Pumo10g01166 10 15098103 15103468 PCT