Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01316 ATGAGAGAACAAGGGGTCTTTCATCTTGAGGAACATGGGCAGACAGAGAGGTCCCAGTGGGTGCTTGATTCTCCCAACCCTCCCCCTCTCTGGAAGAAGCTATTTAGTTCTGTCAAGGAAACCATTTTGCCTCATGGGAGCAAGTTCTGCTTCTCATCCAAGAGGAAAACTTCCCATGGGCATGCACTCTCATGCTTGCAGAATTTGTTCCCAATCATTAGTTGGTTAAGAGATTACAAAGCCTCCAAGTTCAAAGATGACCTCTTGGCTGGCTTAACTCTTGCCAGCCTCTGCATACCTCAGAGCATAGGATATGCTACTTTAGCAAAAGTTGCTCCTGAATATGGCCTGTATACCAGTGTTGTTCCTCCTCTTATTTATGCTATGATGGGGAGCTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTGTCAATGCTGTTATCTTCTCTGGTCCCAAAAGTGGAAGATCCTGTTGCCAATCCTCTTGCCTATAGAAATCTTGTCTTTACTGTGACTTTCTTCACTGGAATTTTTCAAACTGCATTTGGTGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCTTAGTTGGATTCATGGCAGGTGCTGCCATCATTATTGGTCTTCAGCAGCTCAAAGGGTTGCTGGGGCTTAGTCACTTTACCTCCAAAACAGATGTAATATCGGTGTTGGCATCTGTTTATAAGTCACTACATCATCAAATTGCCTCTGGATCAGAAAAATGGAACCCTCTGAATTTTGTCCTGGGATGTTCATTCTTGATTTTCATTCTAGTTACCCGATTTATTGGCAGAAGAAATAGAAAGCTTTTCTGGTTGCCTGCTATTTCTCCTCTTCTATCAGTTATACTATCAACTTTGATTGTGTATTTGTCCAGAGCTGATAAGCATGGGGTTAATATAATAAAGCATGTCAAAGGAGGCCTGAATCCTGGTTCACTTCACCAGTTGCAATTCCATGGTCCACATGTTGGACAAGCAGCTAAAATTGGTTTGATTTGTGCTGTTATTGCCCTTACTGAAGCAATAGCTGTTGGTCGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGCAACAAAGAAATGTTGTCAATGGGATTCATGAACATTGCAGGATCTTTGACTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCTGTGAATTTCAGTGCAGGGTGTCAAACAGCAGTGTCAAATATTGTGATGGCTGTTACAGTGTTTTTGTCCCTGGAATTATTTACAAGGCTCTTATACTACACCCCTGTGGCTATCCTTGCCTCTATCATCCTCTCTGCTCTTCCTGGATTAATTGACCTAAGTGAGGCTTGCTATATCTGGAAGGTTGACAAATTGGACTTTCTTGCCTGTATTGGTGCTTTTCTTGGGGTCTTGTTTGCAACAGTAGAGATTGGTCTTCTTATTGCAGTGATAATCTCGTTTGCAAAGATACTAATACAATCAATTCGACCTGGAATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCCTTCTGTGATGTTACTCAATATCCCATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCCAATTTTGTCAGAGAAAGAATACTCAAGTGGGTCTCGCAAGATGAAGATGACCTTAAAGAAACCAACAGGGGTCGGGTCCAAGCAGTAATTCTGGACATGACAAACCTGATGAATGTTGATACTTCTGGAATTCTAGCACTTGAGGAACTGCACAAGAGATTGCTTTCCCGTGGGTTAGCTATGGTCAACCCGAGGTGGCTAGTAATTCACAAGCTTAAGCTTGCACACTTTGTAGACAAAATTGGAAAAGAATGGGTTTTCCTTACTGTTGGAGAAGCTGTAGACGCATGTCTCTCTACCAAAATTGCAAGAGCTAATTAA 1965 0.4224 MREQGVFHLEEHGQTERSQWVLDSPNPPPLWKKLFSSVKETILPHGSKFCFSSKRKTSHGHALSCLQNLFPIISWLRDYKASKFKDDLLAGLTLASLCIPQSIGYATLAKVAPEYGLYTSVVPPLIYAMMGSSREIAIGPVAVVSMLLSSLVPKVEDPVANPLAYRNLVFTVTFFTGIFQTAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGLSHFTSKTDVISVLASVYKSLHHQIASGSEKWNPLNFVLGCSFLIFILVTRFIGRRNRKLFWLPAISPLLSVILSTLIVYLSRADKHGVNIIKHVKGGLNPGSLHQLQFHGPHVGQAAKIGLICAVIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAVTVFLSLELFTRLLYYTPVAILASIILSALPGLIDLSEACYIWKVDKLDFLACIGAFLGVLFATVEIGLLIAVIISFAKILIQSIRPGIEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFVRERILKWVSQDEDDLKETNRGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGLAMVNPRWLVIHKLKLAHFVDKIGKEWVFLTVGEAVDACLSTKIARAN 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01316 654 ProSiteProfiles STAS domain profile. 540 645 IPR002645 -
Pumo9g01316 654 Gene3D STAS domain 503 648 IPR036513 -
Pumo9g01316 654 FunFam Sulfate transporter 31 503 648 - -
Pumo9g01316 654 Pfam Sulfate permease family 84 471 IPR011547 GO:0016020
Pumo9g01316 654 Pfam STAS domain 524 641 IPR002645 -
Pumo9g01316 654 SUPERFAMILY SpoIIaa-like 530 645 IPR036513 -
Pumo9g01316 654 CDD STAS_SulP_like_sulfate_transporter 524 638 - -
Pumo9g01316 654 NCBIfam sulfate permease 71 641 IPR001902 GO:0016020|GO:0055085
Pumo9g01316 654 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Pumo9g01316 654 PANTHER SULFATE TRANSPORTER 53 646 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01316 Pumo-Chr9 38713685 38719545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01316 12 650 Inorganic Solute Cotransporters AT5G10180 63.453 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01316 K17469 - gmx:100776591 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01316 9 38713685 38719545 Pumo10g01167 10 15116957 15121468 PCT