Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01297 ATGGCTAGGAGGAGTGTGGGTATGGTTTCTCCTAATAGAACACAGGGTCCACAGTATCCACCAATGGTTAGACAAGGCTCATTGTATAACCTCACATTTGATGAGGTTCAGAGCCAGTTGGGAAACACAGGGAAGCCTCTCCATAGCATGAATTTGGATGAGCTTCAGAAAAATGTGATCTCAGCTGAGAGTGGACAACTTGTGCAAGACCCTTCATCTGATCATCATCACTCATTTATTCTTGGTAACATTGGTAGTTTGAATAATGGCACATTGAGCAACAAAACCAATAATAATAGTATTAGTGAGGCTTGGAGGGGAATTGTTCACCAAGAACATGTGAATAGGTCTTTGGACACCCCCTTGAAACAACCTAGTTTGGGGGAAAACCTAGAAAATTTCCTAGCTCGTGCAGGTGTGATTAATGTAGGAGGTGATCAAGATCACAATGTTAATGTTATTGGTGGTGATGATACTCATCAGCCCCTGATGGGAATGGATCCAATGGTGATGCCTTCACAGCAGGAACAACATTGGTTGCAAATGCAAATTCCTGGTATTAACATGCACCAACATCAGGATCAGCAACAGATAAATATTGGGGGGTGTCAAGATTTTAATGTTCCCAAGTCATTTTATGAGACCCCAGTTATGGAAATTGGTTACTCAGAAAATTCAGGGGGGATTTCAATGTCTCCTGCATATTCAGATTCCAAGAGTGCTGTTTTTGGAAAGAACAAGTATTCAGATGAGGTGCTGGAAAAGACTATTGAGAGGAGGCAGAAGAGAATGGCCAAGAACAGGGAATCTGCTGCAAGATCAAGGGCAAAGAAGCAGGAACACATTAATAAGTTAGAGAAGGAGAAGTGTCGCTTGCAGAAAATGAATAGCCAGCTCAAAAAGCTGAAGGTACACTCAGCAATCCATTTCCAAAGGGAAAAAATATAA 948 0.4167 MARRSVGMVSPNRTQGPQYPPMVRQGSLYNLTFDEVQSQLGNTGKPLHSMNLDELQKNVISAESGQLVQDPSSDHHHSFILGNIGSLNNGTLSNKTNNNSISEAWRGIVHQEHVNRSLDTPLKQPSLGENLENFLARAGVINVGGDQDHNVNVIGGDDTHQPLMGMDPMVMPSQQEQHWLQMQIPGINMHQHQDQQQINIGGCQDFNVPKSFYETPVMEIGYSENSGGISMSPAYSDSKSAVFGKNKYSDEVLEKTIERRQKRMAKNRESAARSRAKKQEHINKLEKEKCRLQKMNSQLKKLKVHSAIHFQREKI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01297 315 MobiDBLite consensus disorder prediction 1 21 - -
Pumo9g01297 315 Coils Coil 268 305 - -
Pumo9g01297 315 Pfam bZIP transcription factor 259 301 IPR004827 GO:0003700|GO:0006355
Pumo9g01297 315 CDD bZIP_plant_BZIP46 259 304 - -
Pumo9g01297 315 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 302 IPR043452 GO:0003700|GO:0045893
Pumo9g01297 315 SUPERFAMILY Leucine zipper domain 259 301 IPR046347 GO:0003700|GO:0006355
Pumo9g01297 315 Gene3D - 257 307 - -
Pumo9g01297 315 SMART brlzneu 255 313 IPR004827 GO:0003700|GO:0006355
Pumo9g01297 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 262 277 IPR004827 GO:0003700|GO:0006355
Pumo9g01297 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 301 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01297 Pumo-Chr9 38330977 38332051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01297 22 304 bZIP Transcription Factor Family AT2G41070 36.014 4.03e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo9g01297 bZIP_1 9.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01297 K14432 - gmx:100808654 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01297 9 38330977 38332051 Pumo9g01297 9 38330977 38332051 ECH