Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01284 ATGCTGAAGCCACCGCCGGGGATTAAAGTATCGGTCGTGGACGACACGCGTTCCACCTGGGGTTTGTTGAGTGCTTCTGATTATGACCAAGAAGAAGAAGAAGAGGTTGGTGGCGTGAGATTGAACAGAGAAAAGGAGGAAAATGCGACCATTATTACTGTTGGCGAGTTTTCGGGGTTTTCTGAGTTGACCAAAGGTGATTCTTCTAGAATTGCGACAATTCGTGGATTTAATGTTGGCGGCAATAACACGCTTGGTTCTTCTAGAACTGCCACGCTTGAATCAAGCATGTTATTACCGCCGGTAACTGCTGGCAAAAGGGTGAGCTTTTTTACATCTCCTAATGCGAGAATCAAGCGTGTTATTACCGCTGGTAACTGGCAAAAGGGTGAGCTTTTGGGGGTTGGTTCGTTTGGCTCTGTTTATGAAGGGATTTCTGAAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCTTTGCTTGATCAAGGGAATCAGGGAAGGCAAAGTGTGTATCAATTGGAACAGGAAATTGCACTTTTGAGTCAATTTGAACATGAGAATATAGTTCAATACATTGGCACTGAAATGGATGCATCAAATCTGTATATCTTTATTGAGCTTGTAACCAAAGGTTCCCTTCGAAACCTCTACCAGACATATACTCTTCGGGATTCTCAAGTATCTGCGTATACAAGACAGATTTTGCATGGTTTAAAGTATCTTCATGATCGAAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTTAAGCTTGCAGATTTTGGATTGGCAAAGGCAATCAAATTGAATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCAGAGGTTGTAAAAGGGAAAAATACAGGTTATGGGCTTCCAGCTGATATATGGAGTTTGGGATGTACTGTGTTGGAGATGTTAACGGGCCAAATTCCATACTGTCACTTAGAATGTATGCAGGCATTGTTTAGAATTGGAAGAGGTGAGCCACCTCTTGTGCCCGATTCTCTTTCAACAGATGCACGGGATTTTATCCTGCAGTGTCTCAAAGTTAATCCAGATGAACGTCCCAGTGCTGCTCAACTCTTGAACCATACCTTTGTCCAAAGGCCACTACATTCCCAGTCCTCTGGTTCTGCATCTCCTTATATTAGACGGGGTTAA 1200 0.4233 MLKPPPGIKVSVVDDTRSTWGLLSASDYDQEEEEEVGGVRLNREKEENATIITVGEFSGFSELTKGDSSRIATIRGFNVGGNNTLGSSRTATLESSMLLPPVTAGKRVSFFTSPNARIKRVITAGNWQKGELLGVGSFGSVYEGISEDGFFFAVKEVSLLDQGNQGRQSVYQLEQEIALLSQFEHENIVQYIGTEMDASNLYIFIELVTKGSLRNLYQTYTLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLADFGLAKAIKLNDVKSCKGTAFWMAPEVVKGKNTGYGLPADIWSLGCTVLEMLTGQIPYCHLECMQALFRIGRGEPPLVPDSLSTDARDFILQCLKVNPDERPSAAQLLNHTFVQRPLHSQSSGSASPYIRRG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01284 399 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Pumo9g01284 399 Pfam Protein kinase domain 128 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01284 399 SMART serkin_6 127 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01284 399 FunFam Mitogen-activated protein kinase 1, putative, expressed 125 393 - -
Pumo9g01284 399 SUPERFAMILY Protein kinase-like (PK-like) 116 386 IPR011009 -
Pumo9g01284 399 ProSiteProfiles Protein kinase domain profile. 127 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01284 399 Gene3D Transferase(Phosphotransferase) domain 1 124 396 - -
Pumo9g01284 399 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 83 394 - -
Pumo9g01284 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01284 Pumo-Chr9 38015705 38041336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01284 126 384 MAP Kinase Kinase Kinase AT4G08500 75.000 4.37e-138 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo9g01284 Pkinase 2.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01284 K13414 - gmx:100819177 599.742