Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01282 ATGGCGGCTTCCGTTGACAACTATCAAAACGGCGTCGTACGCGGCTGCGGCGTGGACCTCAAGCCGCCTCTGCCGTTGGACTCTTCCAGCAGTGACGAGGATGAAAACGACGACGCTTCATACCTCAGAGAACTGATACAAAAAGCCAATGCGGAAATGGAAGAGTCGGTTCTGGACCCGCGCGACGAGTTAACCGCGGATCATTGGGTCGCACGAAACGCCTCCCTGGTCCGTCTCACAGGGAAGCACCCCTTCAACGCGGAGGCCCCACTCCCGCGCCTCATGCACCACGGCTTCATCACCCCGGCCCCACTCCACTACGTCCGCAACCACGGTCCCGTTCCAAGGGAAAAATGGGAAGACTGGACCGTCGAAGTAACCGGTCTAGTCAAACGCCCAACCCGGTTCACCATGGACCAGCTCGTAAGCGAGTTCCCTCACCGCGAGTTCCCCGCGACCCTCGTCTGCAGCGGAAACCGCCGCAAGGAGCTGAACTTAGTGAAACAAACCATCGGCTCCAACATGACCGCCGGCGGGGCCTCCACCTCCGTGTGGCGCGGCGTCCCCCTCCGGCACGTGCTGCGCCGCTGCGGGATCCTGGCACGTGCGAAGGGCGCGCTGCACGTGTGCTTCGAGGGCGCCGAGGATCTCCCCGGGGGCGGTGGGTCCAAGTACGGAACCAGCGTCTCGAGGGACCTGGCCATGGACCCTTCGCGTGACGTCATCCTCGCGTACATGCAAAACGGCGAGCCTCTGCCGCCGGATCACGGGTTCCCCGTGCGCGTGATTATTCCGGGGTTCATCGGTGGGCGAATGGTGAAGTGGCTGAAACGCATTGTCGTTAGCGAGCATGAGTCCGACAATCATTATCACTATAAGGATAATAAAGTACTCCCTTCTCACGTTGATGCAGAACTTGCCAATGAAGAAGGATGGTGGTACAAGCAGGAGTATATCATCAACGACTTGACTATAAACTCAGTGATAACGACGCCGTGTCACGGGGAGATCTTGCCAATCAACTCATGGGCTACGCAGAGGCCTTATGTACTCAGAGGCTACGCATATTCCGGTGCTGGAAGAAAAGTGACACGTGTTGAGGCAACATTGGACGGTGGAGAAACGTGGCACGTGTGCACATTGGACCATCCTGAGAAACCGAACAAATATGGCAAGTATTGGTGCTGGTGCTTCTGGTCATTGGAGGTGGAGGTCATGGACCTTATTGGGACCAAGGAGATTGCGGTTCGAGCTTGGGATGATGGCCTCAACACTCAGCCTGAAAACCTCATTTGGAATGTTATGGGCATGATGAACAACTGTTGGTTCAAAGTGAAAACAAATGTGGGCAAGCCCCGCAAGGGTGAGCTTGGCATAGTGTTTGAACACCCCACCCAGCCAGGAAACCAACCTGGTGGCTGGATGGTAAAGGAAAGACATTTGGAGAAATCACAAGAGGAAAAACCAAGCCTCAAAAGGAGTGGTTCCACGCCTTTCATGAACACAACCTCAAAAATGCTCTCCATCTCAGAAGTCAAAAAGCACTGCAACTCCGACTCTGTATGGATCATCATCCACGGCCACGTCTACGATTGCACCAGCTTCCTCAAAGACCACCCTGGTGGCACTGATAGCATCCTTATTAATGCCGGTACCGACTGCACTGAAGAGTTCGATGCCATCCATTCCGATAAAGCAAGGAAAATGCTCGAAAATTACCGAATCGGCGAGCTCATCACCACAGGCTACACCTCGGACTCATCACCCAATAACTCCGTGCATGGCAATTCTGAATTCACTCATTTGGCCCCTATCAAGGAAATCACCACAACAACACCATCACGCAGGGTGGCCCTCAACTCACGCGAGAAAATCCCATGCAAGCTTGTGTCGAAGACTTACATTTCCCACGATGTGAGGCTTTTTCGTTTCGCATTGCCCTCGGAGGACCAACTATTGGGTTTACCTGTCGGGAAGCACATTTTCCTGCACGCCACCATTAACGACAAGTTATGCATGCGAGCCTACACTCCAACAAGTACCGTGGACGAAGTGGGGTTCTTCAATCTTCTCATCAAGGTGTACTTCAAAGGCGTGCACCCCAAGTTCCCAAACGGAGGACTCATGTCCCAACATTTGGACTCTCTCCCCATTGGGTCCATGTTAGACGTGAAGGGCCCATTGGGCCACATAGAGTACACCGGAAGAGGCAACTTCTTAGTTCACGGACAACAAAGATTTGCGAAAAGGTTAGCCATGCTGGCTGGTGGGACTGGGATCACACCTATTTACCAAGTGGCACAGGCAATTTTGAAGGACCCAGAAGACCGCACAGAAATGCATTTGGTGTATGCTAACCATTCTGAGGATGACATATTATTAAGGGAGGAGTTGGATGCGTGGGCTAAGACACACTGTGATCGGTTCAAGGTGTGGTACGTGGTGGGAATCGCGAAGGAAGGGTGGAGATACAGTGTGGGGCGCATCAATGAGAGTATCATGAGGGAGCATCTTCCAGAAGCATCTATGGATGCCTTGGCTTTGACATGTGGGCCACCACCTATGATTCAGTTTGCGGTGCAACCTAATTTGGAGAAGATGGGATACGATATCAAGAACGATCTACTCGTGTTTTAG 2637 0.532 MAASVDNYQNGVVRGCGVDLKPPLPLDSSSSDEDENDDASYLRELIQKANAEMEESVLDPRDELTADHWVARNASLVRLTGKHPFNAEAPLPRLMHHGFITPAPLHYVRNHGPVPREKWEDWTVEVTGLVKRPTRFTMDQLVSEFPHREFPATLVCSGNRRKELNLVKQTIGSNMTAGGASTSVWRGVPLRHVLRRCGILARAKGALHVCFEGAEDLPGGGGSKYGTSVSRDLAMDPSRDVILAYMQNGEPLPPDHGFPVRVIIPGFIGGRMVKWLKRIVVSEHESDNHYHYKDNKVLPSHVDAELANEEGWWYKQEYIINDLTINSVITTPCHGEILPINSWATQRPYVLRGYAYSGAGRKVTRVEATLDGGETWHVCTLDHPEKPNKYGKYWCWCFWSLEVEVMDLIGTKEIAVRAWDDGLNTQPENLIWNVMGMMNNCWFKVKTNVGKPRKGELGIVFEHPTQPGNQPGGWMVKERHLEKSQEEKPSLKRSGSTPFMNTTSKMLSISEVKKHCNSDSVWIIIHGHVYDCTSFLKDHPGGTDSILINAGTDCTEEFDAIHSDKARKMLENYRIGELITTGYTSDSSPNNSVHGNSEFTHLAPIKEITTTTPSRRVALNSREKIPCKLVSKTYISHDVRLFRFALPSEDQLLGLPVGKHIFLHATINDKLCMRAYTPTSTVDEVGFFNLLIKVYFKGVHPKFPNGGLMSQHLDSLPIGSMLDVKGPLGHIEYTGRGNFLVHGQQRFAKRLAMLAGGTGITPIYQVAQAILKDPEDRTEMHLVYANHSEDDILLREELDAWAKTHCDRFKVWYVVGIAKEGWRYSVGRINESIMREHLPEASMDALALTCGPPPMIQFAVQPNLEKMGYDIKNDLLVF 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01282 878 PANTHER SULFITE REDUCTASE 47 452 - -
Pumo9g01282 878 SUPERFAMILY E set domains 322 448 IPR014756 -
Pumo9g01282 878 Gene3D - 729 878 IPR039261 -
Pumo9g01282 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 822 838 IPR001709 GO:0016491
Pumo9g01282 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 674 681 IPR001709 GO:0016491
Pumo9g01282 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 790 801 IPR001709 GO:0016491
Pumo9g01282 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 538 548 IPR001709 GO:0016491
Pumo9g01282 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 778 787 IPR001709 GO:0016491
Pumo9g01282 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 752 771 IPR001709 GO:0016491
Pumo9g01282 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 846 854 IPR001709 GO:0016491
Pumo9g01282 878 Gene3D - 61 312 IPR036374 -
Pumo9g01282 878 Pfam Oxidoreductase FAD-binding domain 627 733 IPR008333 -
Pumo9g01282 878 FunFam Nitrate reductase 63 312 - -
Pumo9g01282 878 FunFam Sulfite oxidase, mitochondrial 502 582 - -
Pumo9g01282 878 MobiDBLite consensus disorder prediction 19 38 - -
Pumo9g01282 878 FunFam Nitrate reductase 322 498 - -
Pumo9g01282 878 Gene3D Translation factors 614 728 - -
Pumo9g01282 878 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 502 583 IPR036400 -
Pumo9g01282 878 FunFam NADH-cytochrome b5 reductase 613 728 - -
Pumo9g01282 878 Gene3D - 501 581 IPR036400 -
Pumo9g01282 878 SMART Cyt_b5_2 507 579 IPR001199 -
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 269 282 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 163 175 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 430 443 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 99 115 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 320 332 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 77 91 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 351 365 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 365 377 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 417 429 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 178 193 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 152 163 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 236 252 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 392 402 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Eukaryotic molybdopterin domain signature 253 266 IPR008335 GO:0016491
Pumo9g01282 878 PRINTS Cytochrome B5 signature 529 539 IPR001199 -
Pumo9g01282 878 PRINTS Cytochrome B5 signature 539 553 IPR001199 -
Pumo9g01282 878 PRINTS Cytochrome B5 signature 566 578 IPR001199 -
Pumo9g01282 878 PRINTS Cytochrome B5 signature 554 561 IPR001199 -
Pumo9g01282 878 CDD eukary_NR_Moco 62 447 - -
Pumo9g01282 878 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 60 320 IPR036374 -
Pumo9g01282 878 PRINTS Cytochrome B5 reductase signature 752 771 - -
Pumo9g01282 878 PRINTS Cytochrome B5 reductase signature 674 681 - -
Pumo9g01282 878 PRINTS Cytochrome B5 reductase signature 653 664 - -
Pumo9g01282 878 PRINTS Cytochrome B5 reductase signature 719 733 - -
Pumo9g01282 878 PRINTS Cytochrome B5 reductase signature 790 801 - -
Pumo9g01282 878 PRINTS Cytochrome B5 reductase signature 846 854 - -
Pumo9g01282 878 Pfam Mo-co oxidoreductase dimerisation domain 318 448 IPR005066 GO:0016491|GO:0030151
Pumo9g01282 878 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 622 734 IPR017927 GO:0016491
Pumo9g01282 878 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 722 872 IPR039261 -
Pumo9g01282 878 CDD cyt_b5_reduct_like 627 878 - -
Pumo9g01282 878 SUPERFAMILY Riboflavin synthase domain-like 615 734 IPR017938 -
Pumo9g01282 878 PIRSF Nitr_rd_NADH 7 877 IPR012137 GO:0006809|GO:0042128|GO:0050464
Pumo9g01282 878 Pfam Oxidoreductase NAD-binding domain 753 860 IPR001433 GO:0016491
Pumo9g01282 878 FunFam Nitrate reductase [NADH] 729 878 - -
Pumo9g01282 878 Pfam Oxidoreductase molybdopterin binding domain 111 290 IPR000572 -
Pumo9g01282 878 Gene3D - 322 497 - -
Pumo9g01282 878 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 535 542 IPR018506 GO:0020037
Pumo9g01282 878 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 128 163 IPR022407 GO:0043546
Pumo9g01282 878 Pfam Cytochrome b5-like Heme/Steroid binding domain 510 578 IPR001199 -
Pumo9g01282 878 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 504 579 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01282 Pumo-Chr9 37935188 37944257 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01282 610 869 NADPH P450 reductases AT5G17770 39.847 5.08e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01282 K10534 - gmx:100813471 1568.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01282 9 37935188 37944257 Pumo9g01282 9 37935188 37944257 ECH