Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01279 ATGGCGGCTTCCGTTGACAACCGTCAATACGGCAGCCACATAAACGGCGTCGTTCGCGGTGTGATAAAATATAGAGATAGTTGGTGGTACAAGCCGGAATATATCATCAATGAGTTGAATATAAACTCAGTGATAACTGCGCCTTGTCACGAGGAGATCTTGCCCATCAACTCATGGACTACGCAGAGGCCTTACCTAATCAGAGGCTATGCATATTCCGGCTACACCTCAGACTCATCGCCCAACAGCTCCGTGCATGGTAATTCCGAATTTACCCATTTGGCCCCTATTAAGGAAATCCCAACAACACCACCACCACCACACAGTGTGGCTCTCAACCCACGTGAGAAAATCCCATGCAAGCTTGTGTCAAAGACCTCCATTTCCCATGATGTGAGGCTCTTCCGTTTTGCATTGCCCTCAGAGGACCAACTATTGGGATTACCCGTAGGGAAGCACATTTTCTTGTGTGCCACCATTGACGGCAAGCTATGCATGCGAGCCTACACTCCAACAAGTAGTGTGGACGAAGTGGGTTTCTTCGATCTACTCATCAAGGTGTACTTCAAAGGCGTGCACCCCAAGTTCCCAAACGGGGGACTCATGTCTCAGCATTTGGACTCTCTCCCCATTGGGTCTATGTTGGACGTGAAAGGCCCATTGGGCCACATAGAGTACACCGGAAAAGGCAACTTCATGGTTCACGGAAAACCAAGATTCGCGAAGAGGCTGGCCATGCTTGCTGGTGGTACCGGGATAACGCCCATTTACCAAGTGGCGCAAGCGATTCTGAAGGACCCAGAGGATCACACCGAAATGCATGTGGTGTATGCAAATCGCACGGAGGATGATATATTACTAAGGGAGGAGTTGGATGAGTGGGCGAAGAAACATGGTGACCGTTTCAAGGTGTGGTACGTGGTGGGAATCGCGAAGGAAGGGTGGAGATACAATGTGGGGCGCATCAATGAGAGTATCATGAGGGAGCATCTTCCAGAAGCATCTATGGATGCCTTGGCTTTGACATGTGGGCCACCACCTATGATTCAGTTAACGGTGCAACCTAATTTGGAGAAGATGGGATACGATATCAAGAACGATTTGCTCGTGTTTTAG 1116 0.4937 MAASVDNRQYGSHINGVVRGVIKYRDSWWYKPEYIINELNINSVITAPCHEEILPINSWTTQRPYLIRGYAYSGYTSDSSPNSSVHGNSEFTHLAPIKEIPTTPPPPHSVALNPREKIPCKLVSKTSISHDVRLFRFALPSEDQLLGLPVGKHIFLCATIDGKLCMRAYTPTSSVDEVGFFDLLIKVYFKGVHPKFPNGGLMSQHLDSLPIGSMLDVKGPLGHIEYTGKGNFMVHGKPRFAKRLAMLAGGTGITPIYQVAQAILKDPEDHTEMHVVYANRTEDDILLREELDEWAKKHGDRFKVWYVVGIAKEGWRYNVGRINESIMREHLPEASMDALALTCGPPPMIQLTVQPNLEKMGYDIKNDLLVF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01279 371 PRINTS Cytochrome B5 reductase signature 245 264 - -
Pumo9g01279 371 PRINTS Cytochrome B5 reductase signature 167 174 - -
Pumo9g01279 371 PRINTS Cytochrome B5 reductase signature 212 226 - -
Pumo9g01279 371 PRINTS Cytochrome B5 reductase signature 339 347 - -
Pumo9g01279 371 PRINTS Cytochrome B5 reductase signature 146 157 - -
Pumo9g01279 371 PRINTS Cytochrome B5 reductase signature 283 294 - -
Pumo9g01279 371 FunFam Nitrate reductase [NADH] 222 371 - -
Pumo9g01279 371 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 115 227 IPR017927 GO:0016491
Pumo9g01279 371 PRINTS Eukaryotic molybdopterin domain signature 36 48 IPR008335 GO:0016491
Pumo9g01279 371 PRINTS Eukaryotic molybdopterin domain signature 67 81 IPR008335 GO:0016491
Pumo9g01279 371 Gene3D - 38 78 - -
Pumo9g01279 371 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 271 280 IPR001709 GO:0016491
Pumo9g01279 371 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 167 174 IPR001709 GO:0016491
Pumo9g01279 371 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 315 331 IPR001709 GO:0016491
Pumo9g01279 371 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 199 208 IPR001709 GO:0016491
Pumo9g01279 371 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 283 294 IPR001709 GO:0016491
Pumo9g01279 371 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 339 347 IPR001709 GO:0016491
Pumo9g01279 371 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 245 264 IPR001709 GO:0016491
Pumo9g01279 371 Pfam Oxidoreductase NAD-binding domain 246 352 IPR001433 GO:0016491
Pumo9g01279 371 Pfam Oxidoreductase FAD-binding domain 120 226 IPR008333 -
Pumo9g01279 371 Gene3D Translation factors 108 221 - -
Pumo9g01279 371 Gene3D - 222 371 IPR039261 -
Pumo9g01279 371 FunFam NADH-cytochrome b5 reductase 106 221 - -
Pumo9g01279 371 SUPERFAMILY Riboflavin synthase domain-like 109 228 IPR017938 -
Pumo9g01279 371 Pfam Mo-co oxidoreductase dimerisation domain 34 74 IPR005066 GO:0016491|GO:0030151
Pumo9g01279 371 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 215 365 IPR039261 -
Pumo9g01279 371 CDD cyt_b5_reduct_like 120 366 - -
Pumo9g01279 371 PANTHER NADH-CYTOCHROME B5 REDUCTASE 94 367 IPR001834 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01279 Pumo-Chr9 37867318 37873371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01279 110 362 NADPH P450 reductases AT5G17770 40.784 1.53e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01279 K10534 - gmx:100813471 545.814