LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g01268	ATGGAGAGAGAATTGCAATGGATTCTGGTTTTAGCAGTTTGTGCTTCATCAGTCATTAATATTCTTGCCGAGAACAATGAACGGGCTGACAGGAACCTTGCCAATATTGATTATTCAGGTGTTGTAAGCATTGATTGTGGGGTAAACGAAGGCTACACTGACAAGACGACCAATTTGCAATATCAAGCAGATGATATCCAATTTGGTGAAATTTATAACATATCCTCAATTTACAACTTTGACCAAGTAAGTCGAATTCAAAAGCAGCTGAACACATTGAGAAGTTTCCCTTATGGGAAGAGAAATTGCTATACCTTGACACCCAAACAGGGAAAGAACAAAAAATATATTATAAGGGCCTACTTTGCATATGGGAACTATGACAACAAAGCTAAACCACCAATTTTTGATTTGCATCTTGGCGTCAATTTCTTCAAGACAATAAACTTGAGTGAGGCTGATACCGTTATTCGAATTGAAGCTATTCATTTTGCCTCAACAGACACAATTGATTTTTGTCTTGTAAACATTGATCAAGGGGTACCTTTCATTTCATTATTGGAACTATGGCCTTTGGACAATTCTATCTATCAAAGTTCGTCCACTTTGTTAACACTAGATCTCCTTACACGAATTAACCTTGGTGCGTCTGAAGATAACAATTCCTTCATCAGGTACACGGACGATATATATGGAAGGTCTTGGGAAGTTCCAAACAATTACAATGAAAATGCAATGAAAACATCATTAGCTATTGATTTGGACAAACTAGTTGATCCTTACAAATTGCCTACAGAAGTTTTGAGCACTGCAGTGGAGGCAAAGTCCAATTTGGAATTCACACAAAACTATGGCACAGATTCTGAGTATTATGTGTATCTTCACTTTTTTGACTTTGAATATAGGGCAAATAAACAAAAACGGATATTGAATATTGTTATTAATGGTTTTGATGGTGATGATGATGTCACACAATCCCTTACTCTTTCATACTGGAGGCCCAATAGCATAATTCTACCAATAAAACAAGGGATGGGCATTTGGAAGACATTGATTGAAGCCACCTCTGACTTACCTGCCATGCTTAATGCTCTTGAGATTTGCAGAGTAGTACTTCAGTCAGATTCTGCCACTAGACAAGAGGATGTTAATGATATCTGGCACATCAAAGAATTTTATAAGATTTCTAGAATGAATTGGCAAGGAGACCCCTGTGGACCAAATAATTTTACATGGGAAGGTGTCACGTGCAGTAGTGGGGACACTCCAAGAATCATTTCATTAAACTTGAGTTCAAGCAAGTTGTCAGGAGAAATAGATGTCTCATTCTCCAACCTCACATATTTGGAGATTTTGGATTTGTCAAACAATGAATTGACAGGGGAGGTGCCAGATTTTTTTGCTAAATTGCCACAATTAAAGATCCTTAATTTGTCTAGGAATATGCTCACAGGTTCCATTCCTGAGAGTCTACAGGCAAAGTCATCAAACAACTCTTTGCAGTTGAGTTTGGATGAAAATCTCTGTCCCCATCAGACTGGGTCATGTAAGAGCAACCACCGAAAGTTTATTATTCCATTAGTTGCATCTATAACAACATTTGTTGTAGTGGTCCTCATAATATCTATTGTAGTTATGGTGATCAGGAGACTTAGAAAAAAAGGAAAAGTGATTTCTTCAATTTCTGTCAAAGATGAGCTACTGAAATCAACAAATCAAGTATTTTCTTACTCGGAGATTCTTAGAATCACTGATCATTTCTCAACAATGATTGGGAAAGGAGGATTTGGCAAGGTTTACCTAGGTACATTAGAGGGTGGGAAAAAAGTTGCCGTAAAGACACTTTCTTTGCCATCAGCACAAGGGTATAAGGAGTTTCAGTCAGAGGAAAAATTCTTGACACTTGTTCATCATAGAAATGTGGTTTGTCTTGTGGGGTACTGTGACGAAGGTGACACTAAAGCACTTATTTACGAATATCTCCCAAAGGGGAACCTCCAAGAACAATTGTCAGGTTTGTTAATTCTTCATCATAATAACATGCTAGTTACAACTATAGCAAGTGTAAAACTAATTATCAGAAATACAGGATTGGATTATCTGCATAATGGATGCAAGCCACCTATAATTCATAGAGATTTGAAAGGTTCCAACATCTTACTAGATGAAAACATGCATGCCAAGATTTCAGACTTTGGACTGTCTAGAACTTTTGCAAATGACAATGACACTCATGTCTTAACTAATTACCCAGGTGGCACACCGGGTTACCTTGATCCTGATTCTTTTTATGATCTTGGTTTGCTCTTGGATTTGAGGACTTTGGGAGAACAACTCCATCTATGGAGCGGAGCACGGCGAAGCCTTGGAGTTGGAGGGTGCACGCGGCGTAGCACGGTGAAGCCTTGGAGGGTGTGCACGACGGCGTTGATGTGCGACTTAGCCTTAGACGTGAGGCTGCGCCGTGAGTCCGTGACGTAG	2481	0.3886	MERELQWILVLAVCASSVINILAENNERADRNLANIDYSGVVSIDCGVNEGYTDKTTNLQYQADDIQFGEIYNISSIYNFDQVSRIQKQLNTLRSFPYGKRNCYTLTPKQGKNKKYIIRAYFAYGNYDNKAKPPIFDLHLGVNFFKTINLSEADTVIRIEAIHFASTDTIDFCLVNIDQGVPFISLLELWPLDNSIYQSSSTLLTLDLLTRINLGASEDNNSFIRYTDDIYGRSWEVPNNYNENAMKTSLAIDLDKLVDPYKLPTEVLSTAVEAKSNLEFTQNYGTDSEYYVYLHFFDFEYRANKQKRILNIVINGFDGDDDVTQSLTLSYWRPNSIILPIKQGMGIWKTLIEATSDLPAMLNALEICRVVLQSDSATRQEDVNDIWHIKEFYKISRMNWQGDPCGPNNFTWEGVTCSSGDTPRIISLNLSSSKLSGEIDVSFSNLTYLEILDLSNNELTGEVPDFFAKLPQLKILNLSRNMLTGSIPESLQAKSSNNSLQLSLDENLCPHQTGSCKSNHRKFIIPLVASITTFVVVVLIISIVVMVIRRLRKKGKVISSISVKDELLKSTNQVFSYSEILRITDHFSTMIGKGGFGKVYLGTLEGGKKVAVKTLSLPSAQGYKEFQSEEKFLTLVHHRNVVCLVGYCDEGDTKALIYEYLPKGNLQEQLSGLLILHHNNMLVTTIASVKLIIRNTGLDYLHNGCKPPIIHRDLKGSNILLDENMHAKISDFGLSRTFANDNDTHVLTNYPGGTPGYLDPDSFYDLGLLLDLRTLGEQLHLWSGARRSLGVGGCTRRSTVKPWRVCTTALMCDLALDVRLRRESVT	826

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g01268	826	PANTHER	OS07G0107800 PROTEIN-RELATED	42	763	-	-
	Pumo9g01268	826	Pfam	Leucine rich repeat	427	483	IPR001611	GO:0005515
	Pumo9g01268	826	Gene3D	-	206	327	-	-
	Pumo9g01268	826	Gene3D	Phosphorylase Kinase; domain 1	567	660	-	-
	Pumo9g01268	826	Pfam	Protein kinase domain	589	761	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo9g01268	826	Gene3D	Transferase(Phosphotransferase) domain 1	666	783	-	-
	Pumo9g01268	826	FunFam	receptor-like protein kinase FERONIA	551	660	-	-
	Pumo9g01268	826	SMART	serkin_6	585	825	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo9g01268	826	SUPERFAMILY	Protein kinase-like (PK-like)	569	766	IPR011009	-
	Pumo9g01268	826	Gene3D	Ribonuclease Inhibitor	388	505	IPR032675	-
	Pumo9g01268	826	SUPERFAMILY	L domain-like	408	502	-	-
	Pumo9g01268	826	Pfam	Malectin-like domain	44	369	IPR024788	-
	Pumo9g01268	826	PRINTS	Leucine-rich repeat signature	449	462	-	-
	Pumo9g01268	826	PRINTS	Leucine-rich repeat signature	470	483	-	-
	Pumo9g01268	826	ProSiteProfiles	Protein kinase domain profile.	585	826	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo9g01268	826	FunFam	Leucine-rich repeat receptor-like kinase	381	511	-	-
	Pumo9g01268	826	ProSitePatterns	Protein kinases ATP-binding region signature.	591	613	IPR017441	GO:0005524
	Pumo9g01268	826	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	709	721	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g01268	Pumo-Chr9	37465425	37506957	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo9g01268	37	763	Receptor kinase-like Gene Family	AT2G19230	41.074	9.22e-161	488

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Pumo9g01268		Malectin_like	7.9e-75	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo9g01268	-		-	mtr:11437028	820.461