Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01238 ATGGATGAGAACCCTAACCTCTCACTCCCTCGTGCCTCTTCCTCTTCCTCACAGGAATTTCTCAAACAAGTCCAAGCTGCCCTCAAGCGCCATCGCCCTCTCGGTGCAACGCAATCGCATAACGTGAGGCCAAAGCGCTCCATGGTGGCTCAACGGAGGGCCGCGAACAGGTCCGAAGAGGAACCGCCGTCGATTTCCGACACGTGCACCGGCGAAGGCTGCAAAAACGAGCCCTCTTTGCAGGTGGAATCTCAGAGTGTCGCTGCACACAAGAAGGTTCAGTTTTCAACTGAGATCAACAATGCCACTGCTGCACAGCCGCAGGGGGTCAATGTTGTAAAAGCCACCGAGTTGGAGAACATATCATCTCATATGGGTTCACTTGAATTGACAGATGAAGCATTGATTGGATTCAATCAACATGCGAAGCACCAAAATATGCAGCAGGCAGAGTCTGAAACTAGTTTGATATCTGAGGGAGGCAAGAGTTCTCTGCTGCCAAAGAGAACAATAGTTGCTCAGGATCATCTGCAGCAATTCAAAAACTTTTTGAGCCAACCAGCTACACAATCTTCCGTAGTGGGATTGCCATGTCCTACAACTACGTCAGTCCATTCAACTTCAGCTCCAATGCTTAATTCTATAACTCATTGTTCTAATTCCTGTATAGATAGTGGCTCACGTGTGGCTGCAGAACCTTATGGGAACCTGAATGTTAATCCTCATCCTATAACTCAAGGGGCTCTTAAATCACCAAATAATTCCCTGAAAGACACCAATAGAATGTCAATTGATCAGGTGGCAAGTGCAGTCCAAGATTGTGATTCACTAATTGATGCAGAGTTGACATTTAAGCAGAGTGACCCATCTAAGGAGCAGCAAGGATGTATGTTAAAGGAAACAAGTATTTCAAAATATACCTCTTGTCATGATGGCGTGTTAAGTAAAGGGGAAGAGTTTGCAGCTGTTACCAACATACAGCCTCAGGCTCCCACTTCATCTTCAGATGTGAAGTTGGAGTCTTCTAAGTTAGAAAAGCAAGAGAAAAATGCAAGTTATAAAGGATCATTAGGCACTCGAAAGAGGACCTATGACCCTGAATTATTTTTTAAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCAGACTGTGCAATCTATGCACTTAAAAGGATAAAACTAAAGGGTCGTGATTACGCCACTGCATATGGCTTTTGTCAAGAGATTGAGTATCTAAATAAGCTGAAAGGAAAGAATAATATTATCCAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAATAAGGATGGTAGAGTCAAGAATGATGGATATATATACATGGTACTTGAATATGGGGAAATCGATTTGGCTCATATGTTGTCTCAAAAGTGGAAGGAACTGGATGGAAGCAACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCCTTAAAACTGATTGATTTTGGAATAGCCAAAGCAATAATGAGCGATACAACAAACATCCAACGTGATTCACAGGTTGGTACTCTAAGTTACATGTCACCAGAAGCATTTATGTGCAATGAGAGTGATGCAAGTGGAAACATCATAAAATGTGGTCGGCCATCAGATATCTGGTCCCTTGGCTGCATTCTTTATCAAATGGTATATGGGAGAACTCCCTTTGCAGATTTCAAGACATTTTGGGCCAAATTCAAAGTTATAACTGATCCAAATCATGAAATTACTTATGAACCAGTTTCAAATCCATGGCTTCTGGATCTTATGAAAAGGTGTCTAGCATGGGATCGTAATGCAAGGTGGAGAATTCCTCAGCTGCTCCAGCATCCTTTTCTAGTTCCCCCAGTTCCATGTCATCCATCTTTGCCCCAAGACCAAACCTTTAAATTGCTGCAACTTATATCTGAAACTTGCATAAATGACCCAGAAGCATCGCAGCTCTGTTGTCAGCTCCAACAGGTGCTTGGTAATCCCATCAAGTTAACAAGTATTCATTCATTAAATTCGCTGGACCAACAGCGTAAATTGCTGTCCCGAATATCAGAACTCTGTATTCAACTACAGGAACGATTGACAAAGACTGATAAACAATAG 2268 0.425 MDENPNLSLPRASSSSSQEFLKQVQAALKRHRPLGATQSHNVRPKRSMVAQRRAANRSEEEPPSISDTCTGEGCKNEPSLQVESQSVAAHKKVQFSTEINNATAAQPQGVNVVKATELENISSHMGSLELTDEALIGFNQHAKHQNMQQAESETSLISEGGKSSLLPKRTIVAQDHLQQFKNFLSQPATQSSVVGLPCPTTTSVHSTSAPMLNSITHCSNSCIDSGSRVAAEPYGNLNVNPHPITQGALKSPNNSLKDTNRMSIDQVASAVQDCDSLIDAELTFKQSDPSKEQQGCMLKETSISKYTSCHDGVLSKGEEFAAVTNIQPQAPTSSSDVKLESSKLEKQEKNASYKGSLGTRKRTYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCAIYALKRIKLKGRDYATAYGFCQEIEYLNKLKGKNNIIQLIDYEVTDKALFEGVINGSFSNKDGRVKNDGYIYMVLEYGEIDLAHMLSQKWKELDGSNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDASGNIIKCGRPSDIWSLGCILYQMVYGRTPFADFKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNARWRIPQLLQHPFLVPPVPCHPSLPQDQTFKLLQLISETCINDPEASQLCCQLQQVLGNPIKLTSIHSLNSLDQQRKLLSRISELCIQLQERLTKTDKQ 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01238 755 SMART serkin_6 377 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01238 755 PANTHER MIXED LINEAGE PROTEIN KINASE 22 704 - -
Pumo9g01238 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Pumo9g01238 755 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Pumo9g01238 755 SUPERFAMILY Protein kinase-like (PK-like) 371 684 IPR011009 -
Pumo9g01238 755 Pfam Protein kinase domain 377 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01238 755 MobiDBLite consensus disorder prediction 1 23 - -
Pumo9g01238 755 FunFam serine/threonine-protein kinase mph1 isoform X2 370 457 - -
Pumo9g01238 755 MobiDBLite consensus disorder prediction 325 357 - -
Pumo9g01238 755 MobiDBLite consensus disorder prediction 61 77 - -
Pumo9g01238 755 Gene3D Transferase(Phosphotransferase) domain 1 491 672 - -
Pumo9g01238 755 FunFam serine/threonine-protein kinase mph1 isoform X1 491 673 - -
Pumo9g01238 755 MobiDBLite consensus disorder prediction 1 77 - -
Pumo9g01238 755 CDD PKc_Mps1 375 670 IPR027084 -
Pumo9g01238 755 ProSiteProfiles Protein kinase domain profile. 377 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo9g01238 755 Gene3D Phosphorylase Kinase; domain 1 370 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01238 Pumo-Chr9 37068645 37074148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01238 383 671 MAP Kinase Kinase Kinase AT4G08470 29.431 1.37e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Pumo9g01238 Pkinase 3.7e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01238 K08866 - gmx:100795003 1304.66