Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01230 ATGGAGTGTTGTAAGAGGGTATATGAGTGGTTTTGCAATGCAAAATCATATTTGATAATATTGAGCTTGCAATTTGGCTCTGCCGGCATGTACCTTATCACCATGGATGCTCTCAATAAGGGCATGAGTCATTATGTATTTGTCGTTTATCGCAATGTCATCGCCACTGTGGCTCTTGGCCCATTTGCATTTTTTCTTGAAAGGAAAGTTAGGCCCAAGATGACAGTTCGGATATTTTCAGAGATTATGGCAGTCGCTTTTGTCGAGATAATACTTGATCAATGCTTCACGTTCTTGGGTATGAAGTACACATCAGCCTCATTTGCCTCTGCTGTGATGAATTCCGTACCCTCCATTACCTTTGTACTAGCAATCATTTTTCGGGTACGTAAGATATTAATCAAATTGGAGCGCATGAAAATTAAGGAGCTAGGATGTTTAGCCAAAGTGATTGGCACTGCAGTTAGTCTTGGAGGTGCTTTTCTAATGGCATTGTACAAAGGTCCTGTTGTTAATATTGCAGGGTCATCAGCTAGCCACGTGGGACAGCCTGAGAATGTGAACGACCCTTCTGGCAATCACTGGCTCATTGGTGCTTGTTTTCTCCTCATAGGTTGTGCTGGCTTCTCTGCTTTCTACATTTTGCAAGCCATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCCACGTGGGTTTGCTTCGTAGGTGCACTTCAAAGCAGTACAGTTAGTATTTTCATGGAGCGCAATAACCCTCATGTCTGGTCTCTAGCCTTGGATTCTAGGCTTGTTGCTTATGCATACTCGGGAATAGTAACATCAGCAATCCAATTTTATGTGCAAGGCATAGTTATTAAAACCACGGGGCCAGTGTTTGTGACTGCATTTAACCCCCTGCGTATGATCATAGTCACGGCCTTGGCCTGCATAGTCCTCTCAGAGAAACTCCACCTTGGAAGCATAATTGGAGGAGTGGTGGTGGTAATTGGGCTTTATCTAGTAGTGTGGGGCAAAGCTAAAGAACAGAAACATTTGATGCCACCACCGTCCCCTGAAAAGGTAACCCTGCAACGCCAACAACAGCTACCAGTTACTGTTACTGTACCCAGAACTGATAATGATGGCAATGCTCAATTGGTCATAATTGGAGATAATAAAAACGACGACGTGGAAGCCAGAACATTGAATGCAGAGAGCCAGCAGCGACAGTGA 1215 0.4403 MECCKRVYEWFCNAKSYLIILSLQFGSAGMYLITMDALNKGMSHYVFVVYRNVIATVALGPFAFFLERKVRPKMTVRIFSEIMAVAFVEIILDQCFTFLGMKYTSASFASAVMNSVPSITFVLAIIFRVRKILIKLERMKIKELGCLAKVIGTAVSLGGAFLMALYKGPVVNIAGSSASHVGQPENVNDPSGNHWLIGACFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSTVSIFMERNNPHVWSLALDSRLVAYAYSGIVTSAIQFYVQGIVIKTTGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIIGGVVVVIGLYLVVWGKAKEQKHLMPPPSPEKVTLQRQQQLPVTVTVPRTDNDGNAQLVIIGDNKNDDVEARTLNAESQQRQ 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01230 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 165 - -
Pumo9g01230 404 PANTHER WAT1-RELATED PROTEIN 18 351 IPR030184 GO:0016020|GO:0022857
Pumo9g01230 404 Pfam EamA-like transporter family 27 128 IPR000620 GO:0016020
Pumo9g01230 404 Pfam EamA-like transporter family 197 336 IPR000620 GO:0016020
Pumo9g01230 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 341 - -
Pumo9g01230 404 Coils Coil 397 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01230 Pumo-Chr9 36678595 36684546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01230 15 375 Nodulin-like Gene Family AT1G44800 44.628 2.53e-109 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01230 - - gmx:100813852 688.337