Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01225 ATGAAGGGTTCCTGCGATCCCGGCACGCCGAAGCGCCGAAAAGCAGAGCCAAAAGAGCAATGTTCCCCTGCGGCCGAGAACACCAAGAAGAGGAAGTCCCCCGCAAAACTCACTCCAAGAAAAAAAGCTTCCAAGAATAGCACCCCGAAGAAGAATAGCACACCGAAGAAAAATGGATCGGTTGTCGGTTCGCCTGATTCGGCTTGGAAGATCGATTTGCGGTTGGAGGCAAAATTGTCAGCGGAGGAAGATTCGAGGATGTTTGCAGGACGGAAAATACATCCGTTTTTTTCGTTGTGGAAGGAGGAGAGGAAAATTCAGGAGCAGGAACGTCATTTATTGGCGGCTAAGAGGAAAGCGGGAGGAATTACATCTGGTCCTATTCATGTATTTGAAAATGTTCAGGATGATGCTTCACCCCTAGACTGGAGTGGCTGGACATTTTTGGATAAGACCACCACTGCGGATTTTGGTCCAGAAAGTTCAAATTTATCTGTTATGGAGGGTTCTGTTGAATCCTTAAATTTTGATAACTTTCCTTGTGCTTTAAGACCCTCAAGTGCTTCAATTTCTCAGAATGCCATGTCTTGCCCAAGTCAACTTTCTATACAGCCAGATAGTATGCTGGAAATATCACCACCAAACTCAGCTGTGCTAGCTAATGAGCAAGCAATATGTTCAAAGCCAGAAGATGCCAAAGTGGACCTGGACTTGGAGGTGAATGAAAATACCTTTTCAGGGCATGAGGGCATTTTCAGAAAGTCAGATACTGAGCCACTGAGTAAATTTCTTCAAGAAAGTATGAGGTCTTACTACCATAGTTGTAAAGGTAAGGCTGAGAGCAGCTTATGGATACATAAGTACAAGCCAACAAAGGCCTTTGAGGTGTGTGGTAATGAAGAGGCTATGAATTTCTTGCGTGACTGGTTACATCTTTGGCATGAAAGGCATTATCAATGCAGAAAGGGTTCCTCTAACAGGGATCGAAGTAACAGGCAAGATGATGATGATGATTATATCTGTTCTGATAGTGACTATGCTTCAGAAGATATTAATGAGAAGGATTCCCTACAGAATGTTCTTTTGATTACGGGACCAATTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAAGAACAAGGATTTAAGGTTTTAGAGATCAATGCATCAGATTGTCGAAACGGGACTGCTGTCAAGCAAAATTTTGGATTGGTTCTTGAATCACATCACGGAAAGTTCGAAAGGTTACTGGATCACACTGAGAGTTCACATAAGAAAACTGAGAAGTTGCTTCCAGGTCCAGCTTTGCCTAATGGTATAGCAGCTGAGGAGATGGATGATGGGGTGATTGAACTGATAACCATTTCCGATGATGAAGCCCATAGCCTTGGCGGAGCATCTCCGAGATTACATGACAAAAGTAATGTACTTACATGTGGTAGTGTCCAAACTTTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGCAGACGTATCGCTGCCATACAACACATTTCTGAGACAGCAAAAGGGCCAATTATATTGACCAGCAATAGTAATAATGGTGGCCTACCAAATAGTTTTGCAAGACTAAATGTTTCTTTGTCATTGCCATTGCCAGATGAGTTACTTTGCCATATGTACATGGTTTGTGTCACAGAAGAAGTCAACGTCAATCCTCTTTTACTGAAAAAATTCATCCAGTCTTGTGATGGAGATATTCGTAAAACCATTATGCAACTTCAGTTCTGGTCCCAGAGTAAAAAATATAGAAAAGACAGGAAAGTGCAGAAGGTGTATGGCTCACTTCCTTTTGATCTTGAGGCTTGTCATCAGACAATACCAAAGATACTACCCTGGAATTATCCCTCAGAGTTATCCAAACTAATTGAGAAGGAAGTTGCCAAGTCAATAACCATAATGGACGAAAACTCATGTTTGCAGGGGTTAGTTAATAAAGAGCTAGACATAAATGAAAGGAAAAATGATTTAGATGTGCAGTGTATGAAGACTGATTATTTAGAGGCCAAGGTTGAGAGGATCAAGAGATCTCTTACAGACTGCAGTAGGTTTGAAAGTCAACATAGTGCTATTTCTGAACTTTCAAATTGTTCTGGATCCCTGGTAACATCCTCTTGGCAGCAGGGTCAAAGTAAACTTATAGTGATATCCTCTGATTCTGAGGAGAAGGATCCAAATAATGGACATTCTCTAGACATTCATGAGGAAGTTTACAAGAGACATTCCCTTGAAAGCAACAGTGAATATCTCTGCAAGTTTCAACTGAGTCAAACCTACCCCAGTACATCATTTTGCAAACTGGTTTGTTCTGGTTTGGAAGATTCAGAGGAGGAACAGTATAAATATGTAGAAACTGCTTATGATGAAACACGTAAATCATTTGATGTATCCTGTTTTCCAGGATCAATATCTGTTCCTGAGATAGCAATTCAAAATCGAATAAAGCCAATGTCTGGACCAGTGTCTTCTGGCTGCCATGCTGGTCCAGAAGAAGTTTCTCTGAATAATGAGCTGACACAGTTCACTTTGAGTGTTTGTCAGTCCTTAGACAAATTTCCACAAAATTCTGATTCATTGGCAAATACTGAAATTCCAGAATCTTCTTCAAAAGTAGCTGTACAAAATTTCAGAGATGGGAACACAGAAATCACAACTGTATGTAATGTGATAGATGGATGCAGTCATGCTGATTTTAAATCGAAATCAAAGCTTGTTGAGTCCAGCCCATCTACAGCGATGGATATGGTACAAAATTTGTGGAGAAAACTTCGTATTTGTCTGAAGGATTTAGGACAGCATGCCAACCCAGAACAGCTGGGTGTTATTCAAGTTGCTAAACTTACTAGTGGGCTGACCAATCTAATTTCTGAAGCTGACTTACTGTTTCTTACTCACCAACAAAAGCAATGTGGTATTATGGAGCCTGCAATGTCCCTTTCTGATGAAGCCACATATAGTTGGTATGATGAGCAAATGATGATGTCTACTGTTGCTGTACATGGTTTTTGTTTTTATGCCAAACATATATCAGATGTAGGATCTAAGTTTGGTTGTAAGAATGAGGTAGATCTAACTTCAGAGATGTTGGCTTGCACTACTAATATTATGGCACTGGGAAAATTGTCTAGACAGGAACAAACAAAAAGCACAAGTATCTATGCCGAAAAGCAATTAGAGGTGAACAACCCAACAAATGATACGAAGAGAAAATCTTTGCCCAACATGATCCAGTCTATCATTCCTGCAAGATCATCATTGGTAATGAAAGGTCTTGCATTCAATGAATATATATCTTCACTACGCCAAATTTCAATTTCGGAAGGTTTCCGCATTTCAAATGGTTTTGGAAAGATGAGAAAACGAAGGCGGGTTGCTCCACATTATTTGAGCAGAGGTACAATGGCGTTGTCTCCTGAAGATATATCAATGGTGTGCGAAGGTGAATTGTACAGAAAGATTTCTTCACAATATGCTGCTAACATGGAAAGCAACTGTACATGA 3537 0.406 MKGSCDPGTPKRRKAEPKEQCSPAAENTKKRKSPAKLTPRKKASKNSTPKKNSTPKKNGSVVGSPDSAWKIDLRLEAKLSAEEDSRMFAGRKIHPFFSLWKEERKIQEQERHLLAAKRKAGGITSGPIHVFENVQDDASPLDWSGWTFLDKTTTADFGPESSNLSVMEGSVESLNFDNFPCALRPSSASISQNAMSCPSQLSIQPDSMLEISPPNSAVLANEQAICSKPEDAKVDLDLEVNENTFSGHEGIFRKSDTEPLSKFLQESMRSYYHSCKGKAESSLWIHKYKPTKAFEVCGNEEAMNFLRDWLHLWHERHYQCRKGSSNRDRSNRQDDDDDYICSDSDYASEDINEKDSLQNVLLITGPIGSGKSAAVYACAQEQGFKVLEINASDCRNGTAVKQNFGLVLESHHGKFERLLDHTESSHKKTEKLLPGPALPNGIAAEEMDDGVIELITISDDEAHSLGGASPRLHDKSNVLTCGSVQTLILVEDVDILFPEDRRRIAAIQHISETAKGPIILTSNSNNGGLPNSFARLNVSLSLPLPDELLCHMYMVCVTEEVNVNPLLLKKFIQSCDGDIRKTIMQLQFWSQSKKYRKDRKVQKVYGSLPFDLEACHQTIPKILPWNYPSELSKLIEKEVAKSITIMDENSCLQGLVNKELDINERKNDLDVQCMKTDYLEAKVERIKRSLTDCSRFESQHSAISELSNCSGSLVTSSWQQGQSKLIVISSDSEEKDPNNGHSLDIHEEVYKRHSLESNSEYLCKFQLSQTYPSTSFCKLVCSGLEDSEEEQYKYVETAYDETRKSFDVSCFPGSISVPEIAIQNRIKPMSGPVSSGCHAGPEEVSLNNELTQFTLSVCQSLDKFPQNSDSLANTEIPESSSKVAVQNFRDGNTEITTVCNVIDGCSHADFKSKSKLVESSPSTAMDMVQNLWRKLRICLKDLGQHANPEQLGVIQVAKLTSGLTNLISEADLLFLTHQQKQCGIMEPAMSLSDEATYSWYDEQMMMSTVAVHGFCFYAKHISDVGSKFGCKNEVDLTSEMLACTTNIMALGKLSRQEQTKSTSIYAEKQLEVNNPTNDTKRKSLPNMIQSIIPARSSLVMKGLAFNEYISSLRQISISEGFRISNGFGKMRKRRRVAPHYLSRGTMALSPEDISMVCEGELYRKISSQYAANMESNCT 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01225 1178 Coils Coil 99 119 - -
Pumo9g01225 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 282 604 IPR027417 -
Pumo9g01225 1178 Gene3D - 543 606 - -
Pumo9g01225 1178 MobiDBLite consensus disorder prediction 1 65 - -
Pumo9g01225 1178 MobiDBLite consensus disorder prediction 1 33 - -
Pumo9g01225 1178 SMART AAA_5 357 546 IPR003593 GO:0016887
Pumo9g01225 1178 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 15 1167 IPR004582 GO:0006281
Pumo9g01225 1178 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 545 606 - -
Pumo9g01225 1178 Gene3D - 281 536 IPR027417 -
Pumo9g01225 1178 Pfam ATPase family associated with various cellular activities (AAA) 361 407 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01225 Pumo-Chr9 36587466 36598572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01225 275 395 Core DNA Replication Machinery Family AT5G22010 30.400 1.46e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01225 K26118 - gmx:100815984 1964.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01225 9 36587466 36598572 Pumo9g01225 9 36587466 36598572 ECH